Job Description P0A955 Confidence 93.28% Date Thu Jan 5 11:09:25 GMT 2012 Rank 403 Aligned Residues 187 % Identity 12% Template c3e96B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii Resolution 1.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.														.	.														.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.														.	.														.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	.	.	E	A	I	V	G	A	G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	A	Q	F	A
Query Conservation																														.	.	.	.	.	.	.	.														.	.														.	.	.
Alig confidence																														.	.	.	.	.	.	.	.														.	.														.	.	.
Template Conservation
Template Sequence		D	W	H	H	Y	K	E	T	V	D	R	I	V	D	N	G	I	D	V	I	V	P	C	G	N	T	S	E	F	Y	A	L	S	L	E	E	A	K	E	E	V	R	R	T	V	E	Y	V	H	G	R	A	L	V	V	A	G	I	G	Y	A	T	S	T	A	I	E	L	G	N	A	A	K	A	A	G	A	D	A	V
Template Known Secondary structure															T	T	T						T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S								S	S															T		S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		92	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.
Predicted Secondary structure				.	.	.	.	.	.															.	.	.	.							.	.	.																																										.
Query SS confidence				.	.	.	.	.	.															.	.	.	.							.	.	.																																										.
Query Sequence		I	S	.	.	.	.	.	.	P	G	L	T	E	P	L	L	K	A	A	T	E	G	.	.	.	.	T	I	P	L	I	P	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	.	Q	V	R
Query Conservation				.	.	.	.	.	.															.	.	.	.							.	.	.																																										.
Alig confidence				.	.	.	.	.	.															.	.	.	.							.	.	.																							.	.																		.
Template Conservation																																																											.	.
Template Sequence		M	I	H	M	P	I	H	P	Y	V	T	A	G	G	V	Y	A	Y	F	R	D	I	I	E	A	L	D	F	P	S	L	V	Y	F	K	D	P	E	I	S	D	R	V	L	V	D	L	A	P	L	Q	N	L	V	G	V	K	.	.	Y	A	I	N	D	L	P	R	F	A	K	V	V	R	S	I	P	E	E	H	Q
Template Known Secondary structure									S																				S									T	T	S		T							T	T		T	T						.	.														T	T	S		G	G	G
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	.	.	.	.	.	.	.	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K	L
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	W	I	C	G	T	A	E	K	W	A	P	F	F	W	H	A	G	A	K	G	F	T	S	G	L	V	N	L	L	P	Q	K	A	V	E	M	L	E	A	L	R	N	N	D	N	D	A	V	W	R	I	W	E	D	I	V	P	F	E	D	L
Template Known Secondary structure							T	T		T	T	T								T							S	G	G	G	T														T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions