Job Description P0A955 Confidence 99.30% Date Thu Jan 5 11:09:25 GMT 2012 Rank 69 Aligned Residues 195 % Identity 9% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		K	T	S	A	E	S	I	L	T	T	G	P	V	V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.										.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		K	L	S	L	I	Q	Q	L	K	Q	Q	K	L	S	V	G	I	L	S	A	N	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	.	T	H	C	F	K	D	V	H	L	X	V	R	N
Template Known Secondary structure										T	T							G	G	G	S		G	G	G											T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	.	T	T	S									S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.																					.	.	.	.										.	.	.	.	.	.	.	.	.											.	.
Query SS confidence		.	.																					.	.	.	.										.	.	.	.	.	.	.	.	.											.	.
Query Sequence		.	.	Q	Q	L	A	E	V	T	E	A	G	A	Q	F	A	I	S	P	G	L	T	.	.	.	.	E	P	L	L	K	A	A	T	E	.	.	.	.	.	.	.	.	.	G	T	I	P	L	I	P	G	I	S	.	.	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N
Query Conservation		.	.																					.	.	.	.										.	.	.	.	.	.	.	.	.											.	.
Alig confidence		.	.																					.	.	.	.										.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	I	D	V	I	Q	L	L	T	L	D	P	R
Template Known Secondary structure												T	T		S						T	T		T	T	S									T	T						T	T													T	T	S		G	G	G	G	T	T	T	T	T	T		S						S			T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		141	.									.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.													.	.	.	.																								.	.
Query SS confidence				.	.	.	.	.	.	.	.													.	.	.	.																								.	.
Query Sequence		G	G	.	.	.	.	.	.	.	.	V	K	A	L	Q	A	I	A	G	P	F	S	.	.	.	.	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	.	.	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E
Query Conservation				.	.	.	.	.	.	.	.													.	.	.	.																								.	.
Alig confidence				.	.	.	.	.	.	.	.													.	.	.	.																								.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	G	E	.	.	.	.	.	.	.	.	.	L	K	T	N	L	K	V
Template Known Secondary structure		T	T																				G	G	G	G	G	G							S	S												S	S	S									G	G	G	G	S	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.										.	.	.	.	.	.	230
		207	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	K	S	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions