Job Description P0A955 Confidence 94.56% Date Thu Jan 5 11:09:25 GMT 2012 Rank 357 Aligned Residues 189 % Identity 8% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	.	.	.	V	L	N	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	F
Query Conservation																																.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		P	I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	R	L	T	E	G	L	H	T	H	C	P	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R	G	G	X	L	P	L	K	P	D	X
Template Known Secondary structure				S															T											T	T	S																				S	T	T									T	T	T			G	G	G	G	G	T	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.																.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	S	P	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	V	S	E	L	M	L	G	M	D	.	.	.	.	.	.	.	.	.	.	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N	A	X	P	A	D	R	E	V
Template Known Secondary structure							S					S	S	S																				T								S	S													T	T		S		S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure														.	.	.	.	.	.																					.
Query SS confidence														.	.	.	.	.	.																					.
Query Sequence		L	Q	A	I	A	G	P	F	S	Q	V	R	.	.	.	.	.	.	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	.	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A
Query Conservation														.	.	.	.	.	.																					.
Alig confidence														.	.	.	.	.	.																					.
Template Conservation
Template Sequence		F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	I	G	A	N	Q	L	T	V	N	E	W	A	I	A	A	G	G	H	T	R	T	G	L	E	D	N	I	R	L	D	R	Q	T	L	A	P	S	N	A	A	L	V	R	R	S	V	E	L	C	D	K	Y
Template Known Secondary structure														T	T	S								T	T												T	T						S	T	T	T			B	S	S	S	S		B																		T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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