Job Description P0A955 Confidence 96.77% Date Thu Jan 5 11:09:25 GMT 2012 Rank 249 Aligned Residues 192 % Identity 15% Template c3bvjA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; PDBTitle: crystal structure of human orotidine 5'-monophosphate decarboxylase2 complexed with xmp Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.	.																																		.	.																					.	.	.	.
Query SS confidence											.	.																																		.	.																					.	.	.	.
Query Sequence		K	T	S	A	E	S	I	L	T	.	.	T	G	P	V	V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	.	.	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	.	.	.	.	A	I	V	G	A	G	T	V	L	N
Query Conservation											.	.																																		.	.																					.	.	.	.
Alig confidence											.	.																											.							.	.																					.	.	.	.
Template Conservation																																							.
Template Sequence		A	S	K	L	L	R	L	M	Q	K	K	E	T	N	L	C	L	S	A	D	V	S	L	A	R	E	L	L	Q	L	A	D	A	L	G	P	S	.	I	C	M	L	K	T	H	V	D	I	L	N	D	F	T	L	D	V	M	K	E	L	I	T	L	A	K	C	H	E	F	L	I	F	E	D	R	K	F	A	D	I
Template Known Secondary structure													T										S													G	G	G	.		S						G	G	G		T	T																	T											S
Template Predicted Secondary structure																																							.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure											.	.	.	.	.	.	.													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	Q	L	A	E	V	T	E	.	.	.	.	.	.	.	A	G	A	Q	F	A	I	S	P	G	L	T	.	.	.	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	E	L	M	L	G	M	D	Y	G	L	K
Query Conservation											.	.	.	.	.	.	.													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	T	V	K	K	Q	Y	E	G	G	I	F	K	I	A	S	W	A	D	L	V	N	A	H	V	V	P	G	S	G	V	V	K	G	L	Q	E	V	G	L	P	L	H	R	G	C	L	L	I	A	E	M	S	S	T	G	S	L	A	T	G	D	Y	T	R	A	A	V	R	M	A	E	E	H	S	E	F	V	V
Template Known Secondary structure											S	T	T	T		G	G	G	T		S						S	T	T		T											T	T	T	T											S	T	T																		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.												.
Query Sequence		E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V	R	F	C	P	T	G	.	.	.	.	.	.	.	.	.	.	G	I	S	P	A	N	Y	R	D	Y	L	.	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R
Query Conservation																																		.	.	.	.	.	.	.	.	.	.												.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.												.																					.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Sequence		G	F	I	S	G	S	R	V	S	M	K	.	.	.	.	.	.	.	.	.	.	.	.	P	E	F	L	H	L	T	P	G	V	Q	L	E	A	G	G	D	N	L	G	Q	Q	Y	N	S	P	Q	E	V	I	G	K	R	G	S	D	I	I	I	V	G	R	G	I	I	S	A	A	D	R	L	.	E	A	A	E	M
Template Known Secondary structure						S	S						.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						S	B		S	S			B		T	T	S		B		B								T	T			S					S					T	S	S				.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220													.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	K	L	A	R	E	A	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	K	A	A	W	E	A	Y	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions