Job Description P0A955 Confidence 89.56% Date Thu Jan 5 11:09:25 GMT 2012 Rank 474 Aligned Residues 184 % Identity 15% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	.	.	.	A	I	V	G	A	G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	A	Q	F
Query Conservation																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Alig confidence																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Template Conservation
Template Sequence		D	F	D	K	L	S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	A	S	I	A	M	S	K	W	A	E	S	I	G	V	D	G
Template Known Secondary structure																T	T							S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		91	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.
Query Sequence		A	I	S	.	.	.	.	.	.	P	G	L	T	E	P	L	L	K	A	A	T	E	G	.	.	.	.	T	I	P	L	I	P	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F
Query Conservation					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.																							.	.
Template Conservation																																																																.	.
Template Sequence		L	L	V	I	T	P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	K	N	I	V	A	V	K	.	.	E	A	S	G	N	I	S	Q	I	A	Q	I	K	A	L	C
Template Known Secondary structure									S	S																	T			S												S												T	T	S	S	S						.	.			S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	.	.	.	.	.	.	.	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence											.	.																													.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		G	D	K	L	D	I	Y	S	G	.	.	N	D	D	Q	I	I	P	I	L	A	L	G	G	I	G	V	I	S	V	L	A	N	V	I	P	E	D	V	H	N	M	C	E	L	Y	L	N	G	K	V	N	E	A	L	K	I	Q	L	D	S	L	A	L	T	N
Template Known Secondary structure		G	G	G						S	.	.		G	G	G							T	T							S	G	G	G	T														T	T												T
Template Predicted Secondary structure											.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions