Job Description P0A955 Confidence 91.97% Date Thu Jan 5 11:09:25 GMT 2012 Rank 425 Aligned Residues 179 % Identity 15% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																								.	.	.	.	.	.	.	.																					.	.	.													.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																					.	.	.													.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	.	.	.	.	.	.	.	.	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	.	.	.	A	I	V	G	A	G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	A	Q	F
Query Conservation																								.	.	.	.	.	.	.	.																					.	.	.													.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																					.	.	.													.	.	.
Template Conservation
Template Sequence		D	I	D	A	M	I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V	D	S	I	E	D	A	A	D	Q	S	A	E	A	L	N	A	G	A	R	N
Template Known Secondary structure																T	T		S					S	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G								S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		91	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.															.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.															.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query Sequence		A	I	S	.	.	.	.	.	.	.	P	G	L	T	E	P	L	L	K	A	A	T	E	G	.	.	.	.	.	.	.	T	I	P	L	I	P	.	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A
Query Conservation					.	.	.	.	.	.	.															.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.															.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																													.
Template Conservation																																																																											.
Template Sequence		I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L	V	G	R	L	K	A	A	F	P	G	I	V	T	G	V	K	D	S	S	G	N	.	W	S	H	T	E	R
Template Known Secondary structure									S	S		S																			T	T														S																T	T	T								S			.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		I	A	G	P	F	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	.	.	.	.	.	G	D	Y	D	R	I	T	K	L	A	R	E	A
Query Conservation																																																.	.	.	.	.
Alig confidence															.	.	.																															.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		L	L	K	E	H	G	D	L	A	I	L	I	G	.	.	.	D	E	R	D	L	A	R	G	V	R	L	G	G	Q	G	A	I	S	G	V	A	N	F	L	T	Q	E	V	R	A	M	A	V	D	G	K	D	D	P	R	I	V	D	L	V	V	E	L
Template Known Secondary structure							T	T	S						.	.	.											T	T							S	G	G	G	T										T	T														G
Template Predicted Secondary structure															.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions