Job Description P0A955 Confidence 88.30% Date Thu Jan 5 11:09:25 GMT 2012 Rank 496 Aligned Residues 101 % Identity 20% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	T	S	A	E	S	I	L	T	T	G	P	V	V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q	Q	L	A	E	V
Query Conservation
Alig confidence															.																				.
Template Conservation															.																				.
Template Sequence		I	A	D	I	L	E	F	N	L	R	K	E	G	.	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	.	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M	L	T	A	K	D	S	E	I	D	K	V	I	G
Template Known Secondary structure														T	.								S												.			S						T	T		S	S	S															S								T	T
Template Predicted Secondary structure															.																				.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		84	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	E	A	G	A	Q	.	F	A	I	S	P	G	L	T	E	P	L	L	K	A	A	T	E
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		L	E	I	G	A	D	D	Y	V	T	K	P	F	S	T	R	E	L	L	A	R	V	K	A
Template Known Secondary structure				T	T								S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions