Job Description P0A955 Confidence 98.89% Date Thu Jan 5 11:09:25 GMT 2012 Rank 119 Aligned Residues 184 % Identity 17% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																					.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	.	.	.	.	E	V	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	.	.	.	.	.	.	.	.	T	V	L	N	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	F	A	I	S
Query Conservation																					.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	I	N	K	I	I	A	E	V	A	E	K	F	G	I	P	M	G	V	G	S	Q	R	V	A	I	E	K	A	E	A	R	E	S	F	A	I	V	R	K	V	A	P	T	I	P	I	I	A	N	L	G	M	P	Q	L	V	K	G	Y	G	L	K	E	F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V
Template Known Secondary structure																T															G	G	G	S											S	S	S								G	G	G	G	T	T	T													T	T		S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		94	.																			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	.	G	I	.	.	.	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.			.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	A	L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	M	E	T	A	K	L	L	Y	S	Y	G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I
Template Known Secondary structure											S	S	S							T														S	S							S	S	S													T	T									B	T	S	B
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
																			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V	R	F	C	P	T	G	G	I	.	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																										.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V	P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	A	I	A	L	G	A	D	I	A	G	M	A	L	P	V	L	K	S	.	.	.	A	I	E	G	K	E	S	L	E
Template Known Secondary structure			T	T		T								T	T	T		S		B												S	T	T							S	S			S											T		S												.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.
		202	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	R	E	A	V	E	G	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	F	R	K	I	I	F	E	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions