Job Description P0A955 Confidence 96.50% Date Thu Jan 5 11:09:25 GMT 2012 Rank 259 Aligned Residues 161 % Identity 17% Template c2zc8B_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8 Resolution 1.95 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																									.	.	.	.	.																				.
Query SS confidence																																																									.	.	.	.	.																				.
Query Sequence		V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	.	.	.	.	.	T	V	L	N	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	F	A	.
Query Conservation																																																									.	.	.	.	.																				.
Alig confidence																																																									.	.	.	.	.																				.
Template Conservation
Template Sequence		V	S	L	G	I	Q	P	S	V	E	D	T	L	R	V	V	E	R	H	L	E	E	G	Y	R	R	I	K	L	K	I	K	P	G	W	D	Y	E	V	L	K	A	V	R	E	A	F	P	E	A	T	L	T	A	D	A	N	S	A	Y	S	L	A	N	L	A	Q	L	K	R	L	D	E	L	R	L	D	Y	I	E
Template Known Secondary structure								S	S														T	T		S							B	T	T	B	S												T	T	S							T	T				G	G	G							G	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
				92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.																								.	.															.																											.											.
Query SS confidence		.	.																								.	.															.																											.											.
Query Sequence		.	.	I	S	P	G	L	T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	.	.	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	.	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	.	Q	V	R	F	C	P	T	G	G	I	.
Query Conservation		.	.																								.	.															.																											.											.
Alig confidence		.	.																								.	.															.																											.											.
Template Conservation
Template Sequence		Q	P	L	A	Y	D	D	L	L	D	H	A	K	L	Q	R	E	L	S	T	P	I	C	L	D	E	S	L	T	G	A	E	K	A	R	K	A	I	E	L	G	A	G	R	V	F	N	V	K	P	A	R	L	G	G	H	G	E	S	L	R	V	H	A	L	A	E	S	A	G	I	P	L	W	M	G	G	M	L	E
Template Known Secondary structure				S		T	T		S											S	S					S	T	T			S											T			S										T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	A	N	Y	R	D	Y	L	A	L	K	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	V	G	R	A	H	N	L	H	L	A	T	L
Template Known Secondary structure													T	T	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions