Job Description P0A955 Confidence 98.90% Date Thu Jan 5 11:09:25 GMT 2012 Rank 118 Aligned Residues 174 % Identity 17% Template c2zbtB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8 Resolution 1.65 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query Sequence		V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	F	A	.	.	.	.	I	S
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation
Template Sequence		P	E	Q	A	V	I	A	E	E	A	G	A	V	A	V	M	A	L	E	R	V	P	A	D	I	R	A	Q	G	G	V	A	R	M	S	D	P	K	I	I	K	E	I	M	A	A	V	S	I	P	V	M	A	K	V	R	I	G	H	F	V	E	A	M	I	L	E	A	I	G	V	D	F	I	D	E	S	E	V	L
Template Known Secondary structure												T		S						S	S								T	T																			S	S								T	T											T	T		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	L	T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	A	D	E	E	H	H	I	D	K	W	K	F	K	V	P	F	V	C	G	A	R	N	L	G	E	A	L	R	R	I	A	E	G	A	A	M	I	R	T	K	G	E	A	G	T	G	N	V	V	E	A	V	R	H	A	R	T	M	W	K	E	I	R	Y	V	Q	S	L	R	E	D	E	L	M	A	Y	A	K
Template Known Secondary structure				S		S	S					G	G	G		S	S							S	S										T	T		S								S	S	S			T																				S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
						142	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.														.											.
Query SS confidence		.	.	.	.														.											.
Query Sequence		.	.	.	.	G	V	K	A	L	Q	A	I	A	G	P	F	S	.	Q	V	R	F	C	P	T	G	G	I	.	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A
Query Conservation		.	.	.	.														.											.
Alig confidence		.	.	.	.														.											.																														.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		E	I	G	A	P	F	E	L	V	K	W	V	H	D	H	G	R	L	P	V	V	N	F	A	A	G	G	I	A	T	P	A	D	A	A	L	M	M	H	L	G	M	D	G	V	F	V	G	S	G	I	F	K	S	G	D	P	R	.	.	.	.	.	.	.	.	K	R	A	R	A	I	V	R	A	V
Template Known Secondary structure				T													S	S		S	S				B		S	S			S										T	T		S						G	G	G	G	G	S	S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions