Return to main results Retrieve Phyre Job Id

Job DescriptionP0A955
Confidence100.00%DateThu Jan 5 11:09:25 GMT 2012
Rank6Aligned Residues201
% Identity23%Templatec2v82A_
PDB info PDB header:lyaseChain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60...... ...70.........80.........90
Predicted Secondary structure 

















.







Query SS confidence 






















































.























Query Sequence  LTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPE. AIVGAGTVLNPQQLAEVTEAGAQF
Query Conservation 
    

 

           


   


  


          
  
      .  

   
   
    
  



 
Alig confidence 






















































.























Template Conservation      




 
          
     

   



       
 
  
          
   
     
  
   

  
Template Sequence  QTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARXGCQL
Template Known Secondary structure 
SSS

TT

T

TTSTTTTTS


STT

Template Predicted Secondary structure 



























Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   91........100.........110.........120.........130.........140.........150... ......160.........
Predicted Secondary structure 
























.







Query SS confidence 






























































.















Query Sequence  AISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPF. SQVRFCPTGGISPANY
Query Conservation 
        
       
     

 
  
   
   


 
   
         
  
    .  


   


   
 
Alig confidence 


















































.










.















Template Conservation 
                
     

 
  
   
   


 
   
     .              




 


   

Template Sequence  IVTPNIHSEVIRRAVGYGXTVCPGCATATEAFTALEAGAQALKIFPSSAFG. PQYIKALKAVLPSDIAVFAVGGVTPENL
Template Known Secondary structure 
SS

TT


STT
STT
.TTS
TT
SS

TTT
Template Predicted Secondary structure 























.








Template SS confidence 















































































   84.....90.........100.........110.........120.........130.... .....140.........150.........160..
 
   170.........180.........190.........200.........210...
Predicted Secondary structure 












Query SS confidence 











































Query Sequence  RDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL
Query Conservation     
 


  
 


 
     
       
    
  
     
Alig confidence 











































Template Conservation     
  

  
 


 
    
                  
 
 
Template Sequence  AQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQL
Template Known Secondary structure  T
S
TTT

TT


Template Predicted Secondary structure 









Template SS confidence 











































   163......170.........180.........190.........200......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions