Job Description P0A955 Confidence 89.48% Date Thu Jan 5 11:09:25 GMT 2012 Rank 476 Aligned Residues 187 % Identity 18% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	.	.	.	A	I	V	G	A	G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	A	Q	F
Query Conservation																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Alig confidence																														.	.	.	.	.	.	.	.															.	.	.													.	.	.
Template Conservation
Template Sequence		D	I	E	A	F	S	A	L	I	A	R	L	D	A	A	E	V	D	S	V	G	I	L	G	S	T	G	I	Y	X	Y	L	T	R	E	E	R	R	R	A	I	E	A	A	A	T	I	L	R	G	R	R	T	L	X	A	G	I	G	A	L	R	T	D	E	A	V	A	L	A	K	D	A	E	A	A	G	A	D	A
Template Known Secondary structure																T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S															T		S
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		91	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.																				.	.
Query SS confidence					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.																				.	.
Query Sequence		A	I	S	.	.	.	.	.	.	P	G	L	T	E	P	L	L	K	A	A	T	E	G	.	.	.	.	T	I	P	L	I	P	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	.	.	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G
Query Conservation					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.																				.	.
Alig confidence					.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		L	L	L	A	P	V	S	Y	T	P	L	T	Q	E	E	A	Y	H	H	F	A	A	V	A	G	A	T	A	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	F	S	D	E	L	L	V	R	L	A	Y	I	P	N	I	R	A	I	K	X	P	L	P	A	D	A	D	Y	A	G	E	L	A	R	L	R	P
Template Known Secondary structure									S	S																			S	S								G	G	G	T														T	S	T	T										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		P	F	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	.	.	.	.	.	.	.	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K	L
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence														.	.																										.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		K	L	S	D	D	F	A	I	G	Y	S	G	.	.	D	W	G	C	T	D	A	T	L	A	G	G	D	T	W	Y	S	V	V	A	G	L	L	P	V	P	A	L	Q	L	X	R	A	A	Q	A	G	N	A	E	E	A	K	R	L	D	A	T	F	Q	P	L	W	A	L
Template Known Secondary structure		T	S		T	T								.	.										T	T		S					S	G	G	G	T														T	T												T
Template Predicted Secondary structure														.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions