Job Description P0A955 Confidence 97.30% Date Thu Jan 5 11:09:25 GMT 2012 Rank 225 Aligned Residues 148 % Identity 16% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		12	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																												.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence											.																												.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		L	T	T	G	P	V	V	P	V	.	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	.	.	.	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q	Q	.	.	.	.	.	.	.	.
Query Conservation											.																												.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence											.																												.	.	.																							.	.									.	.	.	.	.	.	.	.
Template Conservation																																																																.	.
Template Sequence		V	K	N	P	S	L	I	C	A	P	V	M	A	D	S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	.	.	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E
Template Known Secondary structure				S											S	S															T		S						G	G	G		S	S															S	S				.	.					B	G	G	G	T	S	S	B		S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																										.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.																										.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	L	A	E	V	T	E	A	G	A	Q	F	A	I	S	P	G	L	T	E	P	L	L	K	A	A	.	.	.	.	T	E	G	T	I	P	L	I	P	G	I	S	T	.	.	.	.	.	.	.	.	.	.	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	.	F	F	P	A	E
Query Conservation		.	.	.	.	.	.																										.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.																										.	.	.	.														.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		N	E	R	R	D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I	V	K	I	A	T	T	A	V
Template Known Secondary structure														T	T		S																T	T	T				S	S										S	S																		T	T		S									S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V	R	F	C	P	T	G
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		D	I	A	D	V	A	R	M	F	H	I	T	S	K	A	.	Q	V	P	T	I	G	L	V
Template Known Secondary structure		S	G	G	G												.	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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