Job Description P0A955 Confidence 89.21% Date Thu Jan 5 11:09:25 GMT 2012 Rank 478 Aligned Residues 175 % Identity 15% Template c2hmcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens Resolution 1.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																																	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																																	.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	.	.	.	.	.	.	.	.	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	A	Q	F	A	I	S
Query Conservation																								.	.	.	.	.	.	.	.																																	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		D	F	D	A	L	V	R	K	G	K	E	L	I	A	D	G	X	S	A	V	V	Y	C	G	S	X	G	D	W	P	L	L	T	D	E	Q	R	X	E	G	V	E	R	L	V	K	A	G	I	P	V	I	V	G	T	G	A	V	N	T	A	S	A	V	A	H	A	V	H	A	Q	K	V	G	A	K	G	L	X	V
Template Known Secondary structure																T	T							S	S	G	G	G	T	G	G	G	S															T	T										S	S															T		S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
									94	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	P	G	L	T	E	P	L	L	K	A	A	T	E	G	.	.	.	.	.	T	I	P	L	I	P	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S
Query Conservation		.	.	.	.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	R	V	L	S	R	G	S	V	I	A	A	Q	K	A	H	F	K	A	I	L	S	A	A	P	E	I	P	A	V	I	Y	N	S	P	Y	Y	G	F	A	T	R	A	D	L	F	F	A	L	R	A	E	H	K	N	L	V	G	F	K	E	F	G	G	P	A	D	X	R	Y	A	A	E	N	I	T	S	R	D
Template Known Secondary structure						S	S	S	T	T																S	T	T	S							B	G	G	G	T	B															T	T								S												T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K
Query Conservation
Alig confidence														.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	V	T	L	X	I	G	V	D	T	A	.	V	V	H	G	F	V	N	C	G	A	T	G	A	I	T	G	I	G	N	V	L	P	K	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	H	L	C	K	L	S	Q
Template Known Secondary structure		S	S							S	G	G	G	.								S								S	G	G	G	T	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.													.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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