Job Description P0A955 Confidence 97.51% Date Thu Jan 5 11:09:25 GMT 2012 Rank 206 Aligned Residues 163 % Identity 14% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	.	.	.	.	.	.	.	.	.	.	.	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		G	T	E	D	D	I	R	E	L	C	N	E	S	V	K	T	C	P	F	A	A	A	V	C	V	Y	P	K	F	V	K	F	I	N	E	K	I	K	Q	E	I	N	P	F	K	P	K	I	A	C	V	I	N	F	P	Y	G	T	D	S	M	E	K	V	L	N	D	T	E	K	A	L	D	D	G	A	D	E	I	D
Template Known Secondary structure														T	T	S	S	S	S			S						G	G	G												S	S	S			S							S	T	T	T			S																T		S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
								90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.
Predicted Secondary structure		.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																			.	.							.	.	.	.	.																						.	.
Query SS confidence		.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																			.	.							.	.	.	.	.																						.	.
Query Sequence		.	.	.	.	.	.	F	A	I	S	P	G	L	T	.	.	.	.	.	.	.	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	.	.	S	T	V	S	E	L	.	.	.	.	.	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	.	.	V	K	A
Query Conservation		.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																			.	.							.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																			.	.							.	.	.	.	.																						.	.
Template Conservation
Template Sequence		L	V	I	N	Y	K	K	I	I	E	N	T	D	E	G	L	K	E	A	T	K	L	T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I	I	E	V	G	E	L	K	T	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	F	I	K	T	S	T	G	K	V	Q	I	N	A	T	P	S	S
Template Known Secondary structure												S																			T	T	T	S													S													T	T	T		S							S		S	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		146	.	.	.	150	.	.	.												.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.												.											.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.												.											.	.	.
Query Sequence		L	Q	A	I	A	G	P	F	.	.	.	.	.	.	.	.	.	.	.	S	Q	V	R	F	C	P	T	G	G	I	.	S	P	A	N	Y	R	D	Y	L	A	.	.	.	L	K	S	V	L	C	I	G	G	S	W	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.												.											.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.												.											.	.	.
Template Conservation
Template Sequence		V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N	N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T	A	S	H	Y	I	L	L	A	R	R	F	L	F	R	I	G	S	S	S	L	V
Template Known Secondary structure																	G	G	G	T	T	T							S	S			S																					S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions