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Job DescriptionP0A9X1
Confidence96.17%DateThu Jan 5 11:11:37 GMT 2012
Rank349Aligned Residues136
% Identity10%Templatec3te6A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  KPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKR
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Template Sequence  SQNKLFYITNADDSTKFQLVNDVXDELITSSARKELPIFDYIHIDALELXDALYEKIWFAISKENGDISLEALNFYITNV
Template Known Secondary structure  T





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   570.........580.........590.........600.........610.........620.........630.........640.........
 
   108.110.........120.........130.........140.........150.........160.........170.........180.......
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Query Sequence  VQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLVMAK
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Template Sequence  P. . . . . . . . . . . . . . . . . . . . . . . . . KAKKRKTLILIQNPENLLSEKILQYFEKWIS. . SKNSKLSIICVGGHNVTIREQ
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   654 .....660.........670.........680..... ....690.........700......
 
   188.190
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Query Sequence  TDE
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Template Sequence  INI
Template Known Secondary structure  T
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   707..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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