Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9X1
Confidence100.00%DateThu Jan 5 11:11:37 GMT 2012
Rank27Aligned Residues219
% Identity21%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.... .....20.........30.........40.........50.........60..... ....70.
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Query Sequence  VSLENVSVSF. . GQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRNG. . . . . . . . . . . KLRIGY
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Template Sequence  MTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQWRKAFGV
Template Known Secondary structure  SSTTS

TT

TTSSTT
S.TTSSSS
GGG
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   1210.........1220.........1230.........1240.........1250.........1260. ........1270.........1280........
 
   72.......80.........90.........100........ .110.........120.........130.........140...
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Query Sequence  VPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRV. . . . . . . . QAGHLINAPMQKLSGGETQRVLLARALLNRPQLLV
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Template Sequence  IPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILL
Template Known Secondary structure  S





SSB
TTS
S
TTTT
TTTGGGSTTGGG
B

TTTTTS
TT

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   12891290.........1300.........1310.........1320.........1330.........1340.........1350.........1360........
 
   144.....150.........160.........170.........180.........190.... .....200.........210.........220..
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Query Sequence  LDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCL. NHHICCSGTPEVVSLHPEFISMFGPRGA
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Template Sequence  LDEPSAHLDPVTYQIIRRTL. . . KQAFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILELYHYPADRFVAGFIGS
Template Known Secondary structure  SS
...TTTTS
SSGGGSTT
S
SS
S


SBTTSSS
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   13691370.........1380........ .1390.........1400.........1410.........1420.........1430.........1440.....
 
   223....
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Query Sequence  EQLGI
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Template Sequence  PKMNF
Template Known Secondary structure  S

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   1446...1450
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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