Job Description P0A9X1 Confidence 100.00% Date Thu Jan 5 11:11:37 GMT 2012 Rank 46 Aligned Residues 209 % Identity 29% Template c3b5wE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Resolution 5.30 Å

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		5	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.
Predicted Secondary structure												.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	L	E	N	V	S	V	S	F	.	.	G	Q	R	R	V	L	S	D	V	S	L	E	L	K	P	G	K	I	L	T	L	L	G	P	N	G	A	G	K	S	T	L	V	R	V	V	L	G	L	V	T	P	D	E	G	V	I	K	R	N	G	.	.	.	.	.	.	.	.	.	.	.	K	L	R	I	G	Y
Query Conservation												.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M	D	G	H	D	L	R	E	Y	T	L	A	S	L	R	N	Q	V	A	L
Template Known Secondary structure					S	S		B		B		S	S	S	S		B	S	S		S							T	T							S	S	T	T	S	S								T	T	T		S			B	S	S					S	S	S	B	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	Q	K	L	Y	L	D	T	T	L	P	L	T	V	N	R	F	L	R	L	R	P	G	T	H	K	E	D	I	L	P	A	L	K	R	V	Q	A	G	H	L	I	N	A	P	M	Q	K	L	.	.	.	.	.	.	.	.	.	.	.	S	G	G	E	T	Q	R	V	L	L	A	R	A	L	L	N	R	P	Q
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		V	S	Q	N	V	H	L	F	N	D	.	T	V	A	N	N	I	A	Y	A	R	T	E	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	L	R	D	S	P
Template Known Secondary structure				S						S	S	.		B	S	T	T	T	T	S	S	S	S	T	T	S			T	T					T	T	T	T	S	T					T	T	S	S	S	S	S	B					T	T	S		S	S										T					T	S			S
Template Predicted Secondary structure												.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.															.
Query SS confidence																																																								.															.
Query Sequence		L	L	V	L	D	E	P	T	Q	G	V	D	V	N	G	Q	V	A	L	Y	D	L	I	D	Q	L	R	R	E	L	D	C	G	V	L	M	V	S	H	D	L	H	L	V	M	A	K	T	D	E	V	L	C	L	.	N	H	H	I	C	C	S	G	T	P	E	V	V	S	.	L	H	P	E	F	I	S	M	F
Query Conservation																																																								.															.
Alig confidence																													.	.																		.								.															.
Template Conservation																													.	.																		.
Template Sequence		I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	L	Q	.	.	K	N	R	T	S	L	V	I	A	H	R	L	S	T	I	E	K	.	A	D	E	I	V	V	V	E	D	G	V	I	V	E	R	G	T	H	N	D	L	L	E	H	R	G	V	Y	A	Q	L	H
Template Known Secondary structure								T	T	S	S									T	T					T	T	T	.	.	S	S	S							S	S	G	G	G	T	T	T	.		S	S	B					T	T							S	S	S					S		S	S
Template Predicted Secondary structure																													.	.																		.
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.			.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions