Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9X1
Confidence97.43%DateThu Jan 5 11:11:37 GMT 2012
Rank137Aligned Residues113
% Identity16%Templatec2w58B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKR
Query Conservation    

   


 









 
 
      
 
   
                                       
  
Alig confidence 






























................





























...
Template Conservation       
 
 
  




 

 


  
    ................                              ...
Template Sequence  KKMKGLYLHGSFGVGKTYLLAAIANELAKRN. . . . . . . . . . . . . . . . VSSLIVYVPELFRELKHSLQDQTMNEKLDY. . .
Template Known Secondary structure 




SSSSSSS................


TTT
SSST...
Template Predicted Secondary structure 











................




...
Template SS confidence 















































































   11591160.........1170.........1180......... 1190.........1200.........1210.........
 
   108.110.........120.........130.........140...... ...150.........160.........170.........180......
Predicted Secondary structure 











.







Query SS confidence 






































.







































Query Sequence  VQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDE. PTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLVMA
Query Conservation    
          

 
   

 

 

   
 





.
   

      
   
  
    
 


 


    
  
Alig confidence  ............................










.







































Template Conservation  ............................     





 
           
  

  
       




     
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . IKKVPVLMLDDLGAEASSWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAH
Template Known Secondary structure  ............................
SS
SS

TTT

SS
Template Predicted Secondary structure  ............................


















Template SS confidence 















































































   1220.........1230.........1240.........1250.........1260.........1270.
 
   187
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  H
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   1273
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions