Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9X1
Confidence100.00%DateThu Jan 5 11:11:37 GMT 2012
Rank3Aligned Residues209
% Identity31%Templatec2it1B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60........ .70.
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Query Sequence  MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRNGKLR. . . . . . . . . IGY
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Template Sequence  VE. . IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGL
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   2. ......10.........20.........30.........40.........50.........60.........70.........
 
   72.......80........ .90.........100.........110.........120.........130.........140......
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Query Sequence  VPQKLYLDTTLPLTVNR. . . . . FLRLRPGTHKEDILPALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDE
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Template Sequence  VFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDE
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   147..150.........160.........170.........180.........190.... .....200.........210.
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Query Sequence  PTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCL. NHHICCSGTPEVVSLHP
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Template Sequence  PLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKP
Template Known Secondary structure  GGGGS
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   160.........170.........180.........190.........200.........210.........220.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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