Job Description P0A9X1 Confidence 100.00% Date Thu Jan 5 11:11:37 GMT 2012 Rank 53 Aligned Residues 200 % Identity 28% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	S	L	V	S	L	E	N	V	S	V	S	F	G	Q	R	R	V	L	S	D	V	S	L	E	L	K	P	G	K	I	L	T	L	L	G	P	N	G	A	G	K	S	T	L	V	R	V	V	L	G	L	V	T	P	D	E	G	V	I	K	R	N	G	.	.	.	.	.	.	.	.	.	.	.	K	L	R	I
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																																								.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																																								.
Template Sequence		F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I	I
Template Known Secondary structure		T																.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S							T	T
Template Predicted Secondary structure																		.	.																																								.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		G	Y	V	P	Q	K	L	Y	L	D	T	T	L	P	L	T	V	N	R	F	L	R	L	R	P	G	T	H	K	E	D	I	L	P	A	L	K	R	V	Q	A	G	H	L	I	N	A	.	.	.	.	.	P	M	Q	K	L	S	G	G	E	T	Q	R	V	L	L	A	R	A	L	L	N	R	P	Q	L	L	V	L
Query Conservation																																																	.	.	.	.	.
Alig confidence														.												.																							.	.	.	.	.
Template Conservation														.												.
Template Sequence		G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	.	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F
Template Known Secondary structure						S	S					S	S	.	B							T	T	S	T	.	T													T	T								S	T	T	G	G	G		B																		T			S
Template Predicted Secondary structure														.												.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.															.
Query SS confidence																																																				.															.
Query Sequence		D	E	P	T	Q	G	V	D	V	N	G	Q	V	A	L	Y	D	L	I	D	Q	L	R	R	E	L	D	C	G	V	L	M	V	S	H	D	L	H	L	V	M	A	K	T	D	E	V	L	C	L	.	N	H	H	I	C	C	S	G	T	P	E	V	V	S	.	L	H	P	E	F	I	S	M	F
Query Conservation																																																				.															.
Alig confidence										.	.	.	.	.	.	.	.	.	.								.															.										.															.
Template Conservation										.	.	.	.	.	.	.	.	.	.								.															.
Template Sequence		D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	G	E	Y	A	E	M	W
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T															T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.								.															.
Template SS confidence
		180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions