Job Description P0A9X1 Confidence 100.00% Date Thu Jan 5 11:11:37 GMT 2012 Rank 5 Aligned Residues 207 % Identity 31% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.	.	70	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		M	T	S	L	V	S	L	E	N	V	S	V	S	F	G	Q	R	R	V	L	S	D	V	S	L	E	L	K	P	G	K	I	L	T	L	L	G	P	N	G	A	G	K	S	T	L	V	R	V	V	L	G	L	V	T	P	D	E	G	V	I	K	R	N	G	.	.	.	.	.	.	.	.	.	K	L	R	I	G	Y
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence					.																																																														.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		M	V	E	.	V	K	L	E	N	L	T	K	R	F	G	N	F	T	A	V	N	K	L	N	L	T	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	M	I	A	G	L	E	E	P	T	E	G	R	I	Y	F	G	D	R	D	V	T	Y	L	P	P	K	D	R	N	I	S	M
Template Known Secondary structure					.											T	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S		G	G	G	T	T
Template Predicted Secondary structure					.
Template SS confidence
		10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	Q	K	L	Y	L	D	T	T	L	P	L	T	V	N	R	F	L	R	L	R	P	G	T	H	K	E	D	I	L	P	A	L	K	R	V	Q	A	G	H	L	I	N	A	P	M	Q	K	L	S	G	G	E	T	Q	R	V	L	L	A	R	A	L	L	N	R	P	Q	L	L	V	L	D	E	P	T	Q	G	V
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		V	F	Q	H	M	T	V	Y	E	N	I	A	F	P	L	K	.	.	.	K	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	E	E	L	L	N	R	Y	P	A	Q	L	S	G	G	Q	R	Q	R	V	A	V	A	R	A	I	V	V	E	P	D	V	L	L	M	D	E	P	L	S	N	L
Template Known Secondary structure														T	T			.	.	.																		T	T		G	G	G	T	T			G	G	G			S	S												T	T			S						S	T	T	T	T	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	V	N	G	Q	V	A	L	Y	D	L	I	D	Q	L	R	R	E	L	D	C	G	V	L	M	V	S	H	D	L	H	L	V	M	A	K	T	D	E	V	L	C	L	.	N	H	H	I	C	C	S	G	T	P	E	V	V	S	L	H	P
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K	L	K	V	T	T	I	Y	V	T	H	D	Q	V	E	A	M	T	M	G	D	R	I	A	V	M	N	R	G	Q	L	L	Q	I	G	S	P	T	E	V	Y	L	R	P
Template Known Secondary structure																													S										S							T	T														S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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