Job Description P0A9X1 Confidence 99.33% Date Thu Jan 5 11:11:37 GMT 2012 Rank 74 Aligned Residues 181 % Identity 10% Template c1q57G_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna primase/helicase; PDBTitle: the crystal structure of the bifunctional primase-helicase of2 bacteriophage t7 Resolution 3.45 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		F	G	Q	R	R	V	L	S	D	V	S	L	E	L	K	P	G	K	I	L	T	L	L	G	P	N	G	A	G	K	S	T	L	V	R	V	V	L	G	L	V	T	P	D	E	G	V	I	K	R	N	G	.	.	.	.	.	.	K	L	R	I	G	Y	V	P	Q	K	L	Y	L	D	T	T	L	P	L	T	V	N
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	G	C	T	G	I	N	D	K	T	L	G	A	R	G	G	E	V	I	M	V	T	S	G	S	G	M	V	M	S	T	F	V	R	Q	Q	A	L	Q	W	G	T	A	M	G	K	K	V	G	L	A	M	L	E	E	S	V	E	E	T	A	E	D	L	I	G	L	H	N	R	V	R	L	R	Q	S	D	S	L
Template Known Secondary structure			S	S		T	T										T	T								S	S		S														T	T	T	S									T	T	S														T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		R	F	L	R	L	R	P	G	T	H	K	E	D	I	L	P	A	L	K	R	V	Q	A	G	H	L	I	N	A	P	M	Q	K	L	S	G	G	E	T	Q	R	V	L	L	.	.	A	R	A	L	L	N	R	P	Q	L	L	V	L	D	E	P	T	Q	G	V	D	V	N	G	Q	V	A	L	Y	D	L	I	D	Q
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		K	R	E	I	I	E	N	G	K	F	D	Q	W	F	D	E	L	F	G	N	D	T	F	H	L	Y	D	S	F	E	T	D	R	L	L	A	K	L	A	Y	M	R	S	G	L	G	C	D	V	I	I	L	D	H	I	S	I	V	V	S	A	S	G	E	S	D	E	R	K	M	I	D	N	L	M	T	K	L	K	G
Template Known Secondary structure								T	S											T	T	T																							T	T			S							T	T				S			S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.																							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	E	L	D	C	G	V	L	M	V	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	H	L	V	M	A	K	T	D	E	V	L	C	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	K	S	T	G	V	V	L	V	V	I	C	H	L	K	N	P	D	K	G	K	A	H	E	E	G	R	P	V	S	I	T	D	L	R	G	S	G	A	L	R	Q	L	S	D	T	I	I	A	L
Template Known Secondary structure							T													S	S	S	S		S	T	T						S	T	T		S	S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions