Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence99.73%DateThu Jan 5 11:41:56 GMT 2012
Rank65Aligned Residues272
% Identity18%Templated2imra2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases DR0824-like
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.........120.........130.....
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  PPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALK
Query Conservation 




 
 
                                                   
                   
Alig confidence 















........













































.......


Template Conservation 




 
 
       ........                                 
  




 
   .......   
Template Sequence  PPPVNAHTHLDMSAYE. . . . . . . . FQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVW. . . . . . . APE
Template Known Secondary structure 



SS

........
TSTT

TT



.......S
Template Predicted Secondary structure 











........














.......
Template SS confidence 















































































   91........100...... ...110.........120.........130.........140.........150.. ...
 
   136...140.........150.........160... ......170.........180.........190.........200.........210..
Predicted Secondary structure 














...















Query SS confidence 



























. . .
















































Query Sequence  AMLEVKQEVAPWIDLQIVAFPQEGILSY. . . PNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLI
Query Conservation                              ...                                         
       
Alig confidence 



























...
















































Template Conservation                                                  
              
        
       
Template Sequence  VMDALLAREDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPL
Template Known Secondary structure  T
TT


B

GGGTT
BTT

SSSB
T

B
Template Predicted Secondary structure 



























Template SS confidence 















































































   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   213......220......... 230.........240.........250.........260.
Predicted Secondary structure 





...............................









Query SS confidence 
















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .































Query Sequence  DVHCDEIDDEQSRFVET. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VAALAHHEGMGARVTASHTTAMHSYNGAYTSR
Query Conservation    
              ...............................                 
              
Alig confidence 
















...............................






















.......

Template Conservation    
                                                                    .......  
Template Sequence  QIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVT. . . . . . . PD
Template Known Secondary structure  S
SS
STTGGGS
GGGS
SSTS


TT

T
GGG



S

.......
Template Predicted Secondary structure 






















.......
Template SS confidence 















































































   236...240.........250.........260.........270.........280.........290.........300...... ..
 
   262.......270.........280.........290.........300.........310.........320.........330.........340.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQL
Query Conservation                                              

    


                           
Alig confidence 























.........

























....













...
Template Conservation                 
 
      .........       
  


 
  


      ....      
       ...
Template Sequence  DIARVARAGCAVVTCPRSNHHLEC. . . . . . . . . GTFDWPAFAAAGVEVALGTDSVASGE. . . . TLNVREEVTFARQL. . .
Template Known Secondary structure  T


TT
.........



TT





S....
S
T...
Template Predicted Secondary structure 






.........














....


...
Template SS confidence 















































































   309310.........320.........330.. .......340.........350........ .360.........370..
 
   342.......350.........360.....
Predicted Secondary structure 








Query SS confidence 























Query Sequence  MGYGQINDGLNLITHHSARTLNLQ
Query Conservation         


   
 


  


 
Alig confidence 























Template Conservation    

   
 
  

 
 
  


 
Template Sequence  YPGLDPRVLVRAAVKGGQRVVGTP
Template Known Secondary structure 
TTS



Template Predicted Secondary structure 







Template SS confidence 























   373......380.........390......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions