Job Description P25524 Confidence 99.31% Date Thu Jan 5 11:41:56 GMT 2012 Rank 97 Aligned Residues 276 % Identity 13% Template d1un7a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.05

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																		.	.	.	.	.
Query SS confidence																												.	.	.	.	.																																		.	.	.	.	.
Query Sequence		P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L	.	.	.	.	.	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	.	.	.	.	.	G	I	Q	H	V	R	T	H	V	D	V
Query Conservation																												.	.	.	.	.																																		.	.	.	.	.
Alig confidence																												.	.	.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		G	M	I	D	I	H	I	H	G	G	Y	G	A	D	T	M	D	A	S	F	S	T	L	D	I	M	S	S	R	L	P	E	E	G	T	T	S	F	L	A	T	T	I	T	Q	E	H	G	N	I	S	Q	A	L	V	N	A	R	E	W	K	A	A	E	E	S	S	L	L	G	A	E	L	L	G	I	H	L	E	G
Template Known Secondary structure												T	T			G	G	G		S											G	G	G	G	T										S																					S	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		127	.	.	130	.														.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.																.	.	.	.	.	.
Template Sequence		P	F	V	S	P	K	R	A	G	A	Q	P	K	E	W	I	R	P	S	D	V	E	L	F	K	K	W	Q	Q	E	A	G	G	L	I	K	I	V	T	L	A	P	E	.	.	.	.	.	.	E	D	Q	H	F	E	L	I	R	H	L	K	D	E	S	.	.	.	.	.	.	I	I	A	S	M	G	H	T	D	A
Template Known Secondary structure		S	S	S		G	G	G		T	T	S		G	G	G																T	T	T									G	G	.	.	.	.	.	.	G	S	G	G	G									T	T	.	.	.	.	.	.							S	B
Template Predicted Secondary structure																																													.	.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F
Query Conservation
Alig confidence													.	.	.	.																														.	.	.
Template Conservation													.	.	.	.																														.	.	.
Template Sequence		D	S	A	L	L	S	D	A	A	K	A	.	.	.	.	G	A	S	H	M	T	H	L	Y	N	A	M	S	P	F	H	H	R	E	P	G	V	I	G	T	A	L	A	H	.	.	.	D	G	F	V	T	E	L	I	A	D	G	I	H	S	H	P	L	A	A	K	L	A	F	L	A	K	G	S	S	K	L	I	L
Template Known Secondary structure												T	.	.	.	.	T					S	S	T	T	S	S	B					S	S	S											.	.	.	T	T								S	S	S	S	S														T	T	S
Template Predicted Secondary structure													.	.	.	.																														.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K	R	R	G	I	T	R	V	K	E	M	L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		I	T	D	S	M	R	A	K	G	L	K	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	F	G	G	Q	S	V	T	V	R	G	R	T	A	L	L	S	.	D	G	T	L	A	G	S	I	L	K	M	N	E	G	A	R	H	M	R	E	F	T	N	C	S	W	T	D	I	A	N	I
Template Known Secondary structure					B		T	T	T	T	S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T							T	T					T	.	T	S		B		S	B
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.																.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.			.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		T	S	E	N	A	A	K	Q	L	G	I	F	D	R	K	G
Template Known Secondary structure			T								T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions