Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence99.98%DateThu Jan 5 11:41:56 GMT 2012
Rank51Aligned Residues319
% Identity100%Templated1ra0a2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Cytosine deaminase catalytic domain
Resolution1.12

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  FVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAM
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Template Sequence  FVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAM
Template Known Secondary structure 
TTTTT
TTSSS

SS

TT

TT

STT
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   57..60.........70.........80.........90.........100.........110.........120.........130......
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  LEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCD
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Template Conservation                                                            
        
   
     
  
Template Sequence  LEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCD
Template Known Secondary structure  TTT

TT
SSSSTTTT
S


GGGSSST

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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  EIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGIT
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Template Sequence  EIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGIT
Template Known Secondary structure 
SS
TT

T
GGG
GGGGGS
T

TTTT

SS





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   217..220.........230.........240.........250.........260.........270.........280.........290......
 
   298.300.........310.........320.........330.........340.........350.........360.........370......
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Query Sequence  RVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSAN
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Template Sequence  RVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSAN
Template Known Secondary structure 
TT



B
SSBTTBS




TT

SGGGGGGTTT
SS
SS
TTS


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   297..300.........310.........320.........330.........340.........350.........360.........370.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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