Job Description P25524 Confidence 98.83% Date Thu Jan 5 11:41:56 GMT 2012 Rank 116 Aligned Residues 282 % Identity 11% Template d1o12a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																						.	.																																										.	.	.
Query SS confidence																						.	.																																										.	.	.
Query Sequence		P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	.	.	N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	.	.	.	Q	H	V	R	T	H	V	D	V	S	D	A	T	L
Query Conservation																						.	.																																										.	.	.
Alig confidence																						.	.																																										.	.	.
Template Conservation
Template Sequence		G	F	V	D	P	H	I	H	G	V	V	G	A	D	T	X	N	C	D	F	S	E	X	E	E	F	L	Y	S	Q	G	V	T	T	F	L	A	T	T	V	S	T	S	L	E	K	X	K	E	I	L	R	K	A	R	D	Y	I	L	E	N	P	S	T	S	L	L	G	V	H	L	E	G	P	Y	I	S	K	E	K
Template Known Secondary structure												T	T			T	T	T	T											T	T	T										S																					T	T		S									S	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	A	H	S	E	K	H	I	R	P	P	S	E	R	E	L	S	E	I	D	S	P	A	K	X	L	T	F	A	P	E	I	E	S	S	E	L	L	L	R	L	V	K	R	D	I	V	L	S	A	G	H	S	I	A	.	.	.	.	.	.	.	.	.	.	T	F	E	E	F	X	K	F	Y	K	E	G	V	K
Template Known Secondary structure			T	T	S		T	T	T										T	T			T	T								T	T	S	T	T	G	G	G	G	G	G	G	G	G	G	T							S	B			.	.	.	.	.	.	.	.	.	.										T	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.											180	.	.	.	.	.	.	.	.	.	190	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		R	I	T	H	F	P	N	G	L	K	P	L	H	H	R	E	I	G	I	T	G	A	G	L	L	L	D	.	.	.	D	V	K	L	E	L	I	C	D	G	V	H	L	S	R	E	X	V	K	L	V	Y	K	V	K	K	A	N	G	I	V	L	V	T	D	S	I	S	A	A	G	L	K	D	G	T	T	T	L	G
Template Known Secondary structure				S	S	T	T	T	T	B					S	S												T	.	.	.	T								S	S	S	S	S													T	G	G	G							B		T	T	T	T	S		S					S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	R	R	G	I	T	R	V	K	E	M	L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	Y
Query Conservation																																																																													.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	V	V	K	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	V	P	R	L	E	D	G	T	L	A	G	S	T	L	F	F	S	Q	A	V	K	N	F	R	K	F	T	G	C	S	I	T	E	L	A	K	V	S	S	Y	N	S	C	V	E	L	G	L	D	D	R	G
Template Known Secondary structure		S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T	S		B			B																											T							T	T		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.																	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions