Job Description P25524 Confidence 89.74% Date Thu Jan 5 11:41:56 GMT 2012 Rank 160 Aligned Residues 246 % Identity 13% Template d1ejxc2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 1.60

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.										.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	.	.	.	.	.	.	.	.	.	S	D	A
Query Conservation																																																																						.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	T	H	I	H	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	P	Q	Q	A	E	E	A	L	V	S	G	V	T	T	M	V	G	G	G	T	G	P	A	A	G	T	H	A	T	T	C	T	P
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								T	T										S	S	S						S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1131	.	.	.	.	.	.	.																																							.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		G	P	W	Y	I	S	R	M	L	Q	A	A	D	S	L	P	V	N	I	G	L	L	G	K	G	N	V	.	.	.	.	.	.	.	.	S	Q	P	D	A	L	R	E	Q	V	A	A	G	V	I	G	L	.	.	.	.	.	I	H	E	D	W	G	A	T	P	A	A	I	D	C	A	L	T	V	A	D	E	M	D
Template Known Secondary structure														T	T	S	S	S					B						.	.	.	.	.	.	.	.	S	S											T		S	B		.	.	.	.	.		B	G	G	G																		T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		1173	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.									1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.						.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	V	A	L	H	S	D	T	L	N	E	S	G	F	V	E	D	T	L	A	A	I	.	.	.	.	.	.	.	.	.	G	G	R	T	I	H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	T	A	C	A	H	P	N	I	L	P	S	S	T	N	P	T	L	P	Y	T	L	N	T	I	D	E
Template Known Secondary structure			B				B			T	T		S	S											.	.	.	.	.	.	.	.	.	T	T						S	S	T	T	S	T	T	S	S	S	T	T	T	G	G	G	G	G	G		T	T							S	T	T	S	S		B	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1241	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.										.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.
		290	.															.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	R	G	I	T	R	V	K	E	M	L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		H	L	D	M	L	M	V	C	V	A	F	A	E	S	R	I	R	R	E	T	I	A	A	E	D	V	L	H	D	L	G	A	F	S	L	T	S	S	D	S	Q	A	M	G	.	.	.	R	V	G	E	V	I	L	R	T	W	Q	V	A	H	R	M	K	V	Q	R	G	A	L	A	E	E	T	G	D	N	D	N	F
Template Known Secondary structure																	S														T	T	S	S							T	T	S	S	S	.	.	.		T	T																			S		T	T			S	S	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		1312	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.				.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.
			347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.
Predicted Secondary structure		.																					.	.
Query SS confidence		.																					.	.
Query Sequence		.	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y
Query Conservation		.																					.	.
Alig confidence		.																					.	.
Template Conservation
Template Sequence		R	V	K	R	Y	I	A	K	Y	T	I	N	P	A	L	T	H	G	I	A	H	E	V	G
Template Known Secondary structure											T							T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		1399	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions