Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 43 Aligned Residues 363 % Identity 12% Template c3ooqC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of amidohydrolase from thermotoga maritima msb8 Resolution 2.06 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		L	Q	T	I	I	N	A	R	L	P	G	E	E	G	L	W	.	.	.	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L
Query Conservation																		.	.	.
Alig confidence																		.	.	.																		.	.
Template Conservation																																						.	.
Template Sequence		K	I	L	F	K	N	A	T	V	F	P	I	T	S	R	P	F	K	G	D	V	L	V	S	N	G	K	V	E	K	V	G	E	N	I	E	.	.	D	P	D	A	E	I	V	D	L	T	G	K	F	L	F	P	G	F	V	D	A	H	S	H	I	G	L	F	E	E	G	V	G	Y	Y	Y	S	D	G	N	E	A
Template Known Secondary structure													S	S	S											T	T							S				.	.		S	S	S						T	T														T	T	T	S		T	T	S		G	G	G			S			T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																																					.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		T	D	P	V	T	P	H	V	K	A	L	D	G	F	N	P	Q	.	.	.	.	.	.	D	P	A	I	E	R	A	L	A	G	G	V	T	S	V	X	I	V	P	G	S	A	N	P	V	G	G	Q	G	S	V	I	K	F	R	S	I	I	V	E	E	C	I	V	K	D	P	A	G	L	K	X	A	F	G	E	N
Template Known Secondary structure		T	S	S	B		T	T		B	G	G	G	G			T	T	.	.	.	.	.	.										T	T										S	S	S	S										S			S	S																	S
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
											158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		.	.	.	.	.	.	.	.	.	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	.	.	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F
Query Conservation		.	.	.	.	.	.	.	.	.																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.																																			.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		P	K	R	V	Y	G	E	R	K	Q	T	P	S	T	R	X	G	T	A	G	V	I	R	D	Y	F	T	K	V	K	N	Y	X	K	K	K	E	L	A	Q	K	E	G	K	E	F	T	E	T	D	L	K	X	E	V	G	E	X	V	L	R	K	K	I	P	A	R	X	H	A	H	R	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T		S		S	S																												T	T																		T	T	S	S								S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K	R	R	G	I	T	R	V	K	E	M	L	E	S	G
Query Conservation
Alig confidence																															.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																															.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		A	D	D	I	L	T	A	I	R	I	A	E	E	F	G	F	N	L	V	I	E	H	G	T	E	A	Y	K	I	.	.	.	.	.	.	.	S	K	V	L	A	E	K	K	I	P	V	V	V	G	P	L	L	T	F	R	T	K	L	.	.	.	.	E	L	K	D	L	T	X	E	T	I	A	K	L	L	K	D	G
Template Known Secondary structure																T									T	T	G	G	G	G	.	.	.	.	.	.	.							T	T									S	S				S	G	.	.	.	.	G	G	T	T			T	T								T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		I	N	V	C	F	G	H	D	D	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y	G	I	A	A	G	N	S	A	N	L	I	I	L	P	A	E	N
Query Conservation																																																														.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																					.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	I	A	L	X	C	D	H	P	V	I	P	L	.	.	.	.	.	.	.	.	.	.	E	F	A	T	V	Q	A	A	T	A	X	R	Y	G	A	K	E	E	D	L	L	K	I	L	T	V	N	P	A	K	I	L	G	L	E	D	R	I	G	S	I	E	P	G	K	D	A	D	L	V	V	W	S	G	H	P
Template Known Secondary structure									T	T	T	T	S		G	.	.	.	.	.	.	.	.	.	.	G	G								G	G	G	G	T									T	T	T							T	T		T	T	T	S	S	S			T	T	S	B							S	S		T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.											.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	D	A	L	R	R	Q	V	P	V	R	Y	S	V	R	G	G	K	V	I	A	S	T	Q
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	F	D	X	K	S	V	V	E	R	V	Y	I	D	G	V	E	V	F	R	R	E
Template Known Secondary structure		.	.	.	.	T	S	T	T									T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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