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Job DescriptionP25524
Confidence100.00%DateThu Jan 5 11:41:56 GMT 2012
Rank24Aligned Residues376
% Identity15%Templatec3mpgB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dihydroorotase; PDBTitle: dihydroorotase from bacillus anthracis
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ALQTIINARLPGEEGLW. . . QIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNW. . NQS
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Template Sequence  MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT. . ADNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETGTL
Template Known Secondary structure 

TTS
SSBTT

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   1........10.........20.........30....... ..40.........50.........60.........70........
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  GTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEG
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Template Sequence  AAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFA. . . . FTDDGVG
Template Known Secondary structure  TT
S
SSS
S
SS
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SBGGG
SSSB

TT


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   7980.........90.........100.........110.........120.........130.........140....... ..150....
 
   160.........170.........180.........190.. .......200.........210.........
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Query Sequence  ILSYPNGEALLEEALRLGADVVGAIPHFEFTRE. . . . . . . . . . . . . . . . . . . . YGVESLHKTFALAQKYDRLIDVHCDEI
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Template Conservation                                                                   
              
Template Sequence  VQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVST
Template Known Secondary structure 


TT




GGG
TT
STTTT


TT

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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   220.........230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  DDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRV
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Template Sequence  . . . . KGSVRVIRDAKRAGIKVTAEVTPHHLVLCED. . . . . . . . . . . . . . . . . . . . . DIPSADPNFKMNPPLRGKEDHEAL
Template Known Secondary structure  ....T




GG.....................G

SS
GGG

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   235....240.........250.........260..... ....270.........280.........
 
   300.........310..... ....320.........330.........340.........350.........360.........370
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Query Sequence  KEMLESGINVCFGHDD. . . . . . . . . VFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIA
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Template Sequence  IEGLLDGTIDMIATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLEAGRLK
Template Known Secondary structure  TSS



B



S
TTTS





TTTTTTTTSS
TTTT
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S


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   290.........300.........310.........320.........330.........340.........350.........360.........
 
   371........380.... .....390.........400.........410.
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Query Sequence  AGNSANLIILPAEN. . . . . . . . . . . . . . . . GFDALRRQVPVRYSVRGGKVIASTQPA
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Template Sequence  EGRTADITIIDLEQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKESA
Template Known Secondary structure  TTSB

SS



GGG
SSS



TTTT


TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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