Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence24.04%DateThu Jan 5 11:41:56 GMT 2012
Rank194Aligned Residues133
% Identity18%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.........170.........180.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  KQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVV
Query Conservation                
                                                                 
Alig confidence 















































































Template Conservation     
   
  
   

 

   




   

  

  
             

 

   
  
 
  
  
   


 
Template Sequence  KASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAV
Template Known Secondary structure  TT
SSSGGGTGGGS
TTTS


SST
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   182.......190.........200....... ..210.........220.........230.....
Predicted Secondary structure 








.









Query SS confidence 

























.



























Query Sequence  GAIPHFEFTREYGVESLHKTFALAQK. YDRLIDVHCDEIDDEQSRFVETVAALAH
Query Conservation                         
  .       
                    
Alig confidence 









.














.



























Template Conservation   
  
 
   .
   
      
       

 


 
  

  
       
  
Template Sequence  SAVTPFYYPF. SFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT
Template Known Secondary structure 


SS

.
TTT







T
Template Predicted Secondary structure 






.
















Template SS confidence 






















































   104.....110... ......120.........130.........140.........150.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions