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Job DescriptionP25524
Confidence95.37%DateThu Jan 5 11:41:56 GMT 2012
Rank150Aligned Residues271
% Identity11%Templatec3irsB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110....... ..120.........130......
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Query Sequence  FVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGI. QHVRTHVDVSDATLTALKA
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Template Sequence  IIDFRLRPPAMGFLNARIYTRPDIRNRFTRQLGFEP. . . APSAEEKSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNAD
Template Known Secondary structure  SSB

SSTTGGGS
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   3......10.........20.........30........ .40.........50.........60.........70.........
 
   137..140.........150.........160.........170.........180.........190. ........200.........210.....
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Query Sequence  MLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTR. EYGVESLHKTFALAQKYDRLIDVH
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Template Sequence  VAAVAKAYPDKF. . . . HPVGSIEAATRKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMM
Template Known Secondary structure  STTT....

SSTT



GGGSSS


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GGGTT

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Query Sequence  CDEI. DDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRR
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Template Sequence  TGGNAGPDITYTNPEHIDRVLGDFPDLTVVSSHGNW. . . . . . PWVQEIIHVAFRRPNLYLSPDMYLYNLPG. . . . . . . . .
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SSS
SSSGGGG

TT

GGGT......T

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   156...160.........170.........180.........190. ........200.........210.........220
 
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Query Sequence  GITRVKEMLES. . GINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNL
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Template Sequence  . HADFIQAANSFLADRMLFGTAYPMCP. . . . . . . . . . . . LKEYTEWFLTL. PIKPDAMEKILHGNAERLLAQ
Template Known Secondary structure  .TTTTTTTB




BTSS
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   221........230.........240...... ...250....... ..260.........270........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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