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Job DescriptionP25524
Confidence100.00%DateThu Jan 5 11:41:56 GMT 2012
Rank28Aligned Residues373
% Identity15%Templatec3griB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dihydroorotase; PDBTitle: the crystal structure of a dihydroorotase from staphylococcus aureus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20. ........30.........40.........50.........60.........70...... ...80..
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Query Sequence  QTIINARLPGEEGLW. . QIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNW. . NQSGTL
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Template Sequence  KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEP. SNGVDIIDAKGHFVSPGFVDVHVHLREPGGEYKETIETGTKAAA
Template Known Secondary structure  TTTTTT


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TT

TT




TTT
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   2.......10.........20.........30...... ...40.........50.........60.........70.........80
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  FEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILS
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Template Sequence  RGGFTTVCPXPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPAL. . . . VKEGAFAFTDDGVGVQT
Template Known Secondary structure  TT
S
SSS
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SBGGG
SSSB

....TTT



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S
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   81........90.........100.........110.........120.........130......... 140.........150......
 
   163......170.........180.........190... ......200.........210.........220..
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Query Sequence  YPNGEALLEEALRLGADVVGAIPHFEFTREY. . . . . . . . . . . . . . . . . . . . GVESLHKTFALAQKYDRLIDVHCDEIDDE
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Template Sequence  ASXXYEGXIEAAKVNKAIVAHCEDNSLIYGGAXHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTK. .
Template Known Secondary structure  TT





GGG
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   157..160.........170.........180.........190.........200.........210.........220.........230....
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  QSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEM
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Template Sequence  . . . . . ESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDI. . . . . . . . . . . . . . . . . . PGNNAIYKXNPPLRSTEDREALLEG
Template Known Secondary structure  .....TT




GGG
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GGG

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   235....240.........250.........260...... ...270.........280.........290.
 
   303......310......... 320.........330.........340.........350.........360.........370...
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Query Sequence  LESGINVCFGHDDVFDP. . . . . . . . . WYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGN
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Template Sequence  LLDGTIDCIATDHAPHARDEKAQPXEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNLEYGTLKENG
Template Known Secondary structure  TSS



B



SS
TTTS





TTTTTSSS

TT
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TTS
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   292.......300.........310.........320.........330.........340.........350.........360.........370.
 
   374.....380.... .....390.........400.........
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Query Sequence  SANLIILPAEN. . . . . . . . . . . . . . . . GFDALRRQVPVRYSVRGGKVIASTQ
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Template Sequence  YADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTXVEGEVKFEGD
Template Known Secondary structure  B

SS



GGG

SS



TTTT
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TT

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   372.......380.........390.........400.........410.........420...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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