Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence24.41%DateThu Jan 5 11:41:56 GMT 2012
Rank192Aligned Residues132
% Identity13%Templatec3g0sA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.........170.........180.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  KQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVV
Query Conservation                
                                                                 
Alig confidence 















































































Template Conservation         
      

 

   




   

 


  
             

 

   
    
  
  
   


 
Template Sequence  RSCLKKLIDYHVANGTSAIVSVGTTGESATLSHDEHGDVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGC
Template Known Secondary structure  TT

SSTTTTGGGS
TTSS



SSTTTTSS

Template Predicted Secondary structure 
























Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........100
 
   182.......190.........200.........210.........220.........230....
Predicted Secondary structure 


















Query SS confidence 




















































Query Sequence  GAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALA
Query Conservation                         
         
                   
Alig confidence 









.









































Template Conservation   
  
 
   .
   
      

     

 


 
   
   
      
 
Template Sequence  LTVTPYYNRP. TQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLA
Template Known Secondary structure 


SS

.
T
SS

S



Template Predicted Secondary structure 







.














Template SS confidence 




















































   101........110 .........120.........130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions