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Job DescriptionP25524
Confidence99.97%DateThu Jan 5 11:41:56 GMT 2012
Rank52Aligned Residues352
% Identity16%Templatec3etkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from pyrococcus furiosus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20. ........30.........40 .........50.........60....
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Query Sequence  LQTIINARLPGEEGLW. . . . QIHLQDGKISAIDAQSGVM. . . . PITENSLDAEQGLVIPPFVEPHIH. . . . . . . . . . . . .
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Template Sequence  MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL
Template Known Secondary structure 
SSTTSTT
T

TT


TS
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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   65....70.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDTTQTAGQPNWN
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Template Conservation                                                                     
            
Template Sequence  RGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTG
Template Known Secondary structure  TT

ST

SSS
TS


TTSSS
TTSS





TTTTTT
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  QSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQ
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Template Sequence  IVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGE. . . . . . . . KALKALFELEREGRLKMNVFAY
Template Known Secondary structure  TTS
TT
........TT


S
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   195....200.........210.........220.........230.........240.... .....250.........260......
 
   158.160.........170.........180.........190. ........200.........210.....
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Query Sequence  EGILSYPNGEALLEEALRLGADVVGAIPHFEFTR. . . . . . . . . . . . . . . . . . . . . . EYGVESLHKTFALAQKYDRLIDVH
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Template Conservation                                                                                  
Template Sequence  LSPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVH
Template Known Secondary structure 
GGGT

S
SSS


TTTT
S

SS
BTTBTT




SS
GGGT
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   267..270.........280.........290.........300.........310.........320.........330.........340......
 
   216...220.........230.........240.........250.........260.........270.........280.........290....
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Query Sequence  CDEIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRR.
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Template Sequence  AIGDKAVDVA. . . . . . . LDAFEEAEFSGRIEHASLVRDDQ. . . . . . . LERIKELKVRISAQPHFIVSDWWIVNRVGEERA
Template Known Secondary structure 
S.......TT




B

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T
TTG
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   347..350...... ...360.........370......... 380.........390.........400.........410..
 
   295....300.........310.........320.........330....... ..340.........350.........360...... ...370.
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Query Sequence  GITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLH. . VCQLMGYGQINDGLNLITHHSARTLNLQD. YGIAA
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Template Sequence  KWAYRLKTLSSITKLGFSTD. . . . . . SPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAEDLGKLER
Template Known Secondary structure  GGB

S


T......TTTS




SS
GGG


TTTT
TT
S

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   413......420.........430.. .......440.........450.........460.........470.........480......
 
   372.......380.....
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Query Sequence  GNSANLIILPAENG
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Template Sequence  GFRAEYIILDRDPL
Template Known Secondary structure  TSB

SS
TT
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   487..490.........500
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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