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Job DescriptionP25524
Confidence100.00%DateThu Jan 5 11:41:56 GMT 2012
Rank38Aligned Residues358
% Identity16%Templatec3e74D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:allantoinase; PDBTitle: crystal structure of e. coli allantoinase with iron ions at2 the metal center
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ........30.........40.........50.........60.........70.........80.
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Query Sequence  NALQTIINARLPGEEGLW. . QIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGT
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Template Sequence  SFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQD. . . LGDAKEVXDASGLVVSPGXVDAHTHIG. . . . . . . . . . . . . . .
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S

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TT





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   2.......10.........20.........30...... ...40.........50.........60...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  LFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGIL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . YETGTRAAAKGGITTXIEXPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY
Template Known Secondary structure  .......................TT
SSSSSS


STT

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TT
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   73......80.........90.........100.........110.........120.........
 
   162.......170.........180.........190.........200.........210.....
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Query Sequence  SYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVH. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NIDRLHELDEVG. . . . . . . . . . VVGFCFVRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYV
Template Known Secondary structure 
TTTT..........




B




T

B
S
T

S
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   130.........140. ........150.........160.........170.........180.........190.........
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  CDEIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRG
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Template Sequence  ASRPVFTEVEAIRRVLYLAKVAGC. . . . . . . . RLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTL
Template Known Secondary structure  TS
T
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STT





GG
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   213......220.........230...... ...240.........250.........260.........270.........280....
 
   296 ...300.........310.... .....320.........330.........340.........350....
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Query Sequence  I. . . . . . . . . . . . TRVKEMLESGINVCFGHD. . . . . . . . . DVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLI
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Template Sequence  AKCSPPIRDLENQKGXWEKLFNGEIDCLVSDHSPCPPEXKAGNIXKAWGGIAGLQSCXDVXFDEAVQKRGXSLPXFGKLX
Template Known Secondary structure  G

SS



TT
S



B



GGGS
S
TTTS


B

TTTTTTT


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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   355....360...... ...370.........380... ......390.........400.........410.......
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Query Sequence  THHSARTLNLQD. YGIAAGNSANLIILPAE. . . . . . . . . . . . . . . . NGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYL
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Template Sequence  ATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPK
Template Known Secondary structure  TT
TTSSS

TTSB

SS



GGG

SSS


TTTT
S
TTTTTB

SS

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   365....370.........380.........390.........400.........410.........420.........430.........440....
 
   418.420
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Query Sequence  EQP
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Template Sequence  GQF
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   445..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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