Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 32 Aligned Residues 382 % Identity 15% Template c2z00A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of dihydroorotase from thermus thermophilus Resolution 2.42 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.
Predicted Secondary structure																.	.	.																																																								.	.
Query SS confidence																.	.	.																																																								.	.
Query Sequence		T	I	I	N	A	R	L	P	G	E	E	G	L	W	.	.	.	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	.	.	N	Q	S	G	T	L
Query Conservation																.	.	.																																																								.	.
Alig confidence																.	.	.															.	.	.	.	.																																					.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		L	I	R	N	V	R	L	V	D	A	R	G	E	R	G	P	A	D	V	L	I	G	E	G	R	I	L	S	L	E	G	.	.	.	.	.	G	E	A	K	Q	V	V	D	G	T	G	C	F	L	A	P	G	F	L	D	L	H	A	H	L	R	E	P	G	E	E	V	K	E	D	L	F	S	G	L	L	A	A	V
Template Known Secondary structure											T	T												T	T					S	B		.	.	.	.	.				S						T	T																T	T	T		T	T	T
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S
Query Conservation
Alig confidence																																																																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		R	G	G	Y	T	D	L	V	S	X	P	N	T	K	P	P	V	D	T	P	E	A	V	R	A	L	K	E	K	A	K	A	L	G	L	A	R	L	H	P	A	A	A	L	T	E	K	Q	E	G	K	T	L	T	P	A	G	L	L	R	E	A	G	A	V	L	.	.	.	.	L	T	D	D	G	R	T	N	E	D
Template Known Secondary structure			T	T								S		S	S	S		S		S															T	S	S								S	B	G	G	G		S	S	S	B										T				.	.	.	.				T	T	S
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R
Query Conservation
Alig confidence																																											.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		A	G	V	L	A	A	G	L	L	X	A	A	P	L	G	L	P	V	A	V	H	A	E	D	A	G	L	R	R	N	G	V	X	N	D	G	P	L	A	D	L	.	.	.	.	.	L	G	L	P	G	N	P	P	E	A	E	A	A	R	I	A	R	D	L	E	V	L	R	Y	A	L	R	R	S	P	A	T	P	R
Template Known Secondary structure													G	G	G	T														T	T		S				S						.	.	.	.	.		T																												S	S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.													.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K	R	R	G	I	.	.	.	.	.	.	.	.	.	.	.	.	T	R	V	K	E	M	L	E	S	G	I	N	V	C
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		L	H	V	Q	H	L	S	.	.	.	.	.	.	T	K	R	G	L	E	L	V	R	E	A	K	R	A	G	L	P	V	T	A	E	A	T	P	H	H	L	T	L	T	E	E	A	L	R	T	F	D	P	L	F	K	V	A	P	P	L	R	G	E	E	D	R	E	A	L	L	E	G	L	L	D	G	T	L	D	A
Template Known Secondary structure					T	T			.	.	.	.	.	.														T	T																G	G	G	G	G	G			G	G	G			S	S																		T	S	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		311	.	.	.	.										.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.
Query Sequence		F	G	H	D	D	.	.	.	.	.	.	.	.	.	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	Y	G	I	A	A	G	N	S	A	N	L	I	I	L	P
Query Conservation							.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	T	D	H	A	P	H	T	L	A	E	K	E	K	D	L	L	R	A	P	F	G	I	P	S	L	E	V	A	F	P	L	L	Y	T	E	L	H	L	K	R	G	F	P	L	Q	R	L	V	E	L	F	T	D	G	P	R	R	V	L	G	L	P	P	L	H	L	E	E	G	A	E	A	S	L	V	L	L	S
Template Known Secondary structure						B					T	T	G	G	G	S		T	T	T	S				B			T	T	T									T																T								T						S	S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		382	.	.																.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	A	L	R	R	Q	V	P	V	R	Y	S	V	R	G	G	K	V	I	A	S	T	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	E	R	P	V	D	P	S	A	F	A	S	K	A	R	Y	S	P	W	A	G	W	V	L	G	G	W	P	V	L	T	L	V	A	G	R	I	V	H	E	A	L
Template Known Secondary structure									G	G	G		S	S	S					T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.