Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence100.00%DateThu Jan 5 11:41:56 GMT 2012
Rank39Aligned Residues364
% Identity12%Templatec2vhlB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: the three-dimensional structure of the n-acetylglucosamine-2 6-phosphate deacetylase from bacillus subtilis
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ........30.........40.........50.........60.........70........
Predicted Secondary structure 









...







































..
Query SS confidence 

















. . .
























































. .
Query Sequence  NALQTIINARLPGEEGLW. . . QIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQ. .
Query Conservation      

 



       ...

 
 

 
  

           


  
  
 




 
 
              ..
Alig confidence 

















...
























































..
Template Conservation 
  


 
  
 
         
 
  
 
  

           


  
  
 




 
 
                
Template Sequence  AESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLD
Template Known Secondary structure 



SS
TTSS

SS

S

TT


TTGGG
S
Template Predicted Secondary structure 












































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   7980.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure  ...



























Query SS confidence  . . .












































































Query Sequence  . . . SGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAF
Query Conservation  ...                                     
                                       
Alig confidence  ...



















































...............









Template Conservation           
 
                                           ...............          
Template Sequence  IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLE. . . . . . . . . . . . . . . GPFVSPKRAG
Template Known Secondary structure  GGGGT

S

TTSGGGSSS...............
SSS
GGG
T
Template Predicted Secondary structure 

























...............









Template SS confidence 















































































   82.......90.........100.........110.........120.........130...... ...140......
 
   156...160.........170.........180.........190.........200.........210.........220.........230
Predicted Secondary structure 





























.....
Query SS confidence 










































































. . . . .
Query Sequence  PQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETV. . . . .
Query Conservation                                                   
         
               .....
Alig confidence 


































.....


































.....
Template Conservation                                     .....             
                 
   
    
Template Sequence  AQPKEWIRPSDVELFKKWQQEAGGLIKIVTLAPEE. . . . . DQHFELIRHLKDESIIASMGHTDADSALLSDAAKAGASHM
Template Known Secondary structure  TS
GGG




TTT

GGG.....SGGGTT

SB


TT
Template Predicted Secondary structure 















.....











Template SS confidence 















































































   147..150.........160.........170.........180. ........190.........200.........210.........220.
 
   231........240.........250.........260.........270.........280.........290......
Predicted Secondary structure  ..............




























Query SS confidence  . . . . . . . . . . . . . .

































































Query Sequence  . . . . . . . . . . . . . . AALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGI
Query Conservation  ..............                
                                                 
Alig confidence  ..............































































..
Template Conservation                                                                                ..
Template Sequence  THLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGLKDGVYEFGGQS. .
Template Known Secondary structure  SSTTTTB



SSS

TT

SSSSS

TTS

B
TTTTS
STT..
Template Predicted Secondary structure 


































..
Template SS confidence 















































































   222.......230.........240.........250.........260.........270.........280.........290.........
 
   297..300.........310.........320.........330.........340.........350.........360...... ...370....
Predicted Secondary structure 


























..





Query SS confidence 





































































. .







Query Sequence  TRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQD. . YGIAAGNS
Query Conservation           

    


                                  


   
 


  


  ..
 
  

 
Alig confidence  .....




















.........


































..







Template Conservation  .....                     .........             

  


   
   
  

     
 
  
  
Template Sequence  . . . . . VTVRGRTALLSDGTLAGSILK. . . . . . . . . MNEGARHMREFTNCSWTDIANITSENAAKQLGIFDRKGSVTVGKD
Template Known Secondary structure  .....TT
TT

B
SB


.........


TTT
TTTSSS

TTSB
Template Predicted Secondary structure  .....













.........














Template SS confidence 















































































   300.........310.........320 .........330.........340.........350.........360.....
 
   375....380.........390.........400.........410..
Predicted Secondary structure 
















Query SS confidence 





































Query Sequence  ANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQ
Query Conservation 






 
           
  
   
  
       
Alig confidence 









.........


















Template Conservation 




 
 
 ......... 
  
 
 

 

     
Template Sequence  ADLVIVSSDC. . . . . . . . . EVILTICRGNIAFISKEAD
Template Known Secondary structure 


TT
.........
TT
SS

Template Predicted Secondary structure 





.........







Template SS confidence 





































   366...370..... ....380.........390....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions