Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence39.75%DateThu Jan 5 11:41:56 GMT 2012
Rank171Aligned Residues133
% Identity16%Templatec2rfgB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.........170.........180.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  KQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVV
Query Conservation                
                                                                 
Alig confidence 















































































Template Conservation         
  
   

 

   




   

  

  
             

 

   
   

  
  
   


 
Template Sequence  EKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAV
Template Known Secondary structure  TT
STTSGGGTGGGS
TTSS
B


SSTT
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90.........
 
   182.......190.........200.........210.........220.........230.....
Predicted Secondary structure 


















Query SS confidence 





















































Query Sequence  GAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAH
Query Conservation                         
         
                    
Alig confidence 










.









































Template Conservation   
 

 
   
.   
      

 
  


 


 
   
       
  
  
Template Sequence  LCVAGYYNRPS. QEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA
Template Known Secondary structure 


TTT


.
SS

S



T
Template Predicted Secondary structure 








.














Template SS confidence 





















































   100.........110 .........120.........130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions