Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 45 Aligned Residues 357 % Identity 17% Template c2p9bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:possible prolidase; PDBTitle: crystal structure of putative prolidase from2 bifidobacterium longum Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																						.
Query SS confidence																	.	.	.	.	.	.	.																						.
Query Sequence		A	L	Q	T	I	I	N	A	R	L	P	G	E	E	G	.	.	.	.	.	.	.	L	W	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	.	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W
Query Conservation																	.	.	.	.	.	.	.																						.
Alig confidence																	.	.	.	.	.	.	.																						.																															.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		E	P	F	A	L	A	H	A	T	I	V	T	G	D	K	A	G	T	I	L	R	N	X	T	I	V	V	G	A	D	G	R	I	E	Q	V	A	P	S	I	E	T	S	I	P	A	E	Y	H	Y	L	D	G	T	G	K	I	V	X	P	G	L	I	N	A	H	T	H	L	F	S	Y	X	A	.	.	.	.	.	.
Template Known Secondary structure																T	T													T	T	S	B							G	G	G					T	T							T	T														S						.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	K	H	N	A	T	T	L	L	E	S	G	V	T	T	I	R	T	L	G	D	V	G	Y	E	V	V	T	L	R	D	Q	I	D	A	G	Q	I	L	G	P	R	I	L	A	S	G	P	L	X	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T							S			S	S	S											T	T	S	S										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																												115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		Q	E	G	I	L	S	Y	.	.	.	.	.	.	.	.	.	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	.	.	.	.	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q
Query Conservation									.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																								.	.	.	.																																			.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		P	E	G	H	G	A	P	L	I	A	L	T	S	G	T	P	E	E	A	R	T	A	V	A	Q	N	L	K	A	G	V	N	A	I	K	I	A	A	T	G	G	V	T	D	A	Q	E	I	Q	X	S	V	E	Q	X	R	A	I	C	D	E	A	H	Q	Y	G	V	I	V	G	A	H	A	Q	S	P	E	.	.	.
Template Known Secondary structure				S	S									S																T	T		S							S			T	T	S																					T	T									S			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.													290	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	.	.	.	.	.	.	.	.	.	.	.	.	Y	P
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	V	R	R	S	L	L	A	G	V	D	T	I	E	H	G	S	V	L	D	D	E	L	I	G	X	F	R	H	N	P	N	A	L	R	G	Y	S	A	L	I	P	T	L	S	A	G	L	P	L	T	L	L	G	Q	D	V	T	G	I	T	D	I	Q	L	E	N	S	K	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T		S																				T	T	S	T	T	S																	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		K	R	R	G	I	T	R	V	K	E	M	L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y	G	I
Query Conservation																																																																													.	.
Alig confidence																																			.	.	.	.	.	.	.																																				.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		V	G	G	X	V	S	G	A	R	Q	A	H	E	A	G	L	X	I	G	V	G	T	D	T	G	X	T	F	V	P	Q	Y	A	.	.	.	.	.	.	.	T	W	R	E	L	E	L	L	V	A	Y	A	G	F	S	P	A	E	A	L	H	A	A	T	A	V	N	A	S	I	L	G	V	D	A	E	T	G	S	L
Template Known Secondary structure															T	T			B						T	T	S	T	T	S		T	T		.	.	.	.	.	.	.																								T							T	T		T	T	T	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.								.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	N	S	A	N	L	I	I	L	P	A	E	N	G	F	D	A	L	R	R	Q	V	P	V	R	Y	S	V	R	G	G	K	V	I	A	S	T	Q	P	A	Q	T
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		E	V	G	K	S	A	D	L	L	V	L	N	A	N	.	P	L	D	D	L	R	A	L	E	H	P	A	L	V	I	A	A	G	H	P	V	W	R	P	G	P	K	R	F
Template Known Secondary structure			T	T	S	B							S	S		.	T	T	T		G	G	G	G	T	S		S					T	T					S
Template Predicted Secondary structure																.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.