Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 40 Aligned Residues 381 % Identity 17% Template c2oodA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr3880 protein; PDBTitle: crystal structure of guanine deaminase from bradyrhizobium japonicum Resolution 2.62 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20																		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		A	L	Q	T	I	I	N	A	R	L	P	G	E	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	.	.	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		L	T	T	V	G	I	R	G	T	F	F	D	F	V	D	D	P	W	K	H	I	G	N	E	Q	A	A	A	R	F	H	Q	D	G	L	X	V	V	T	D	G	V	I	K	A	F	G	P	Y	E	K	I	A	A	A	H	P	G	V	E	I	T	H	I	K	D	R	I	I	V	P	G	F	I	D	G	H	I	H	L
Template Known Secondary structure															S	S		G	G	G	S	T	T		G	G	G	G													S	S	B														S	T	T																						G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		P	Q	T	R	V	L	G	A	Y	G	E	Q	L	L	P	W	L	Q	K	S	I	Y	P	E	E	I	K	Y	.	.	K	D	R	N	Y	A	R	E	G	V	K	R	F	L	D	A	L	L	A	A	G	T	T	T	C	Q	A	F	T	S	S	S	P	V	A	T	E	E	L	F	E	E	A	S	R	R	N	X	R	V
Template Known Secondary structure		G	G	T	T		T	T			S											T					G	G	G	.	.	G	S																		T	T										S	S															T
Template Predicted Secondary structure																														.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																													.
Query SS confidence																					.	.	.	.	.																																													.
Query Sequence		P	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S	Y	P	.	.	.	.	.	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	.	D	R	L	I	D	V	H	C	D	E	I
Query Conservation																					.	.	.	.	.																																													.
Alig confidence																					.	.	.	.	.																											.	.																	.
Template Conservation																																																				.	.
Template Sequence		I	A	G	L	T	G	I	D	R	N	A	P	A	E	F	I	D	T	P	E	N	F	Y	R	D	S	K	R	L	I	A	Q	Y	H	D	K	G	R	N	L	Y	A	I	T	P	R	F	A	F	G	.	.	A	S	P	E	L	L	K	A	C	Q	R	L	K	H	E	H	P	D	C	W	V	N	T	H	I	S	E	N
Template Known Secondary structure										S	S	S		T	T	T																			T	T	B	T	T									B	G	G	G	.	.																	T	T	S							S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		D	D	E	Q	S	R	F	V	E	T	.	.	.	.	.	.	.	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		P	A	E	C	S	G	V	L	V	E	H	P	D	C	Q	D	Y	L	G	V	Y	E	K	F	D	L	V	G	P	K	F	S	G	G	H	G	V	Y	L	S	N	N	E	.	.	.	.	.	.	.	F	R	R	X	S	K	K	G	A	A	V	V	F	C	P	C	S	N	L	F	L	G	S	G	L	F	R	L	G	R
Template Known Secondary structure													T	T		S	S							T	T	T			S	T	T							T	T						.	.	.	.	.	.	.								T													T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.																					.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	G	I	T	R	V	K	E	M	L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		A	T	D	P	.	.	.	.	.	.	.	E	H	R	V	K	X	S	F	G	T	D	.	.	.	.	.	V	G	G	G	N	R	F	S	X	I	S	V	L	D	D	A	Y	K	V	G	X	C	N	N	T	L	L	D	G	S	I	D	P	S	R	K	D	L	A	E	A	E	R	N	K	L	S	P	Y	R	G	F	W
Template Known Secondary structure			T		T	.	.	.	.	.	.	.	T	S										.	.	.	.	.	B	T	T	B	S																						S	S	S	S	S		G	G	G									T
Template Predicted Secondary structure						.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		312	.	.	.								.	.	.	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.					.	.	.	.	.	.	390	.	.	.	.																								.	.	.	.	.	400	.	.	.
Predicted Secondary structure																.	.																		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y	G	I	A	A	G	N	S	A	N	L	I	I	L	P	A	E	.	.	.	.	N	G	F	D	A	L	R	R	Q	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	Y	S	V	R	G	G	K
Query Conservation																.	.																		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	T	L	G	G	A	E	G	L	Y	I	D	D	K	L	G	N	F	E	P	G	K	E	A	D	F	V	A	L	D	P	N	G	G	Q	L	A	Q	P	W	H	Q	S	L	I	G	A	G	P	R	T	V	D	E	A	A	S	X	L	F	A	V	X	X	V	G	D	D	R	C	V	D	E	T	W	V	X	G	K
Template Known Secondary structure			T	T							T	T		T	T	T	S	S	S			T	T	S	B								T	T		S	S	T	T						T	T				S			S																	G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		404	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	Y	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.