Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 11 Aligned Residues 404 % Identity 15% Template c2gseC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydropyrimidinase-related protein 2; PDBTitle: crystal structure of human dihydropyrimidinease-like 2 Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.
Predicted Secondary structure																		.	.																																																									.	.	.	.
Query SS confidence																		.	.																																																									.	.	.	.
Query Sequence		L	Q	T	I	I	N	A	R	L	P	G	E	E	G	L	W	.	.	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	.	.	.	.	Q	S
Query Conservation																		.	.																																																									.	.	.	.
Alig confidence																		.	.																			.																																						.	.	.	.
Template Conservation																																						.
Template Sequence		R	L	L	I	K	G	G	K	I	V	N	D	D	Q	S	F	Y	A	D	I	Y	M	E	D	G	L	I	K	Q	I	G	E	N	L	I	V	.	P	G	G	V	K	T	I	E	A	H	S	R	M	V	I	P	G	G	I	D	V	H	T	R	F	Q	M	P	D	Q	G	M	T	S	A	D	D	F	F	Q	G	T	K
Template Known Secondary structure													S	S											T	T							S	S				.		S	S							T	T														T	T				T	T				S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	A	G	G	T	T	M	I	I	D	H	V	V	P	E	P	G	T	S	L	L	A	A	F	D	Q	W	R	E	W	A	D	S	K	S	C	C	D	Y	S	L	H	V	D	I	S	E	W	H	K	G	I	Q	E	E	M	E	A	L	V	K	D	H	G	V	N	S	F	L	V	Y	M	A	F	K	D	R	F
Template Known Secondary structure							T												T	T	S																		S	S									S				T	T												S									S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		Q	L	T	D	C	Q	I	Y	E	V	L	S	V	I	R	D	I	G	A	I	A	Q	V	H	.	.	.	.	.	.	.	.	A	E	N	G	D	I	I	A	E	E	Q	Q	R	I	L	D	L	G	I	T	G	P	E	G	H	V	L	S	R	P	E	E	V	E	A	E	A	V	N	R	A	I	T	I	A	N	Q	T
Template Known Secondary structure		B																T	T							.	.	.	.	.	.	.	.		S															T	T			S	T							S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																		.	.	.	.	300	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K	R	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	R	V	K	E	M
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		N	C	P	L	Y	I	T	K	V	M	.	.	.	.	.	.	S	K	S	S	A	E	V	I	A	Q	A	R	K	K	G	T	V	V	Y	G	E	P	I	T	A	S	L	G	T	D	G	S	H	Y	W	S	K	N	W	A	K	A	A	A	F	V	T	S	P	P	L	S	P	D	P	T	T	P	D	F	L	N	S	L
Template Known Secondary structure		T										.	.	.	.	.	.	S													T	T								B								G	G	G	G	G		S								T			S	S				S		T	T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.													.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	.	.	.	.	.	.	.	.	.	.	.	.	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Conservation
Template Sequence		L	S	C	G	D	L	Q	V	T	G	S	A	H	C	T	F	N	T	A	Q	K	A	V	G	K	D	N	F	T	L	I	P	E	G	T	N	G	T	E	E	R	M	S	V	I	W	D	K	A	V	V	T	G	K	M	D	E	N	Q	F	V	A	V	T	S	T	N	A	A	K	V	F	N	L	Y	P	R	K	G	R
Template Known Secondary structure					T	S	S				B			B									G	G	G	T	T		G	G	G	S				B			T	T	T										T	T	T	S	S	S										T								T		T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.																	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.						.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		I	A	A	G	N	S	A	N	L	I	I	L	P	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	F	D	A	L	R	R	Q	V	P	V	R	Y	S	V	R	G	G	K	V	I	A	S	.	.	.	.	.	T	Q	P	A	Q	T	T	V	Y	L	E	Q	P	E	A	I	D	Y
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																.
Template Conservation																																																																													.
Template Sequence		I	A	V	G	S	D	A	D	L	V	I	W	D	P	D	S	V	K	T	I	S	A	K	T	H	N	S	S	L	E	Y	N	I	F	E	G	M	E	C	R	G	S	P	L	V	V	I	S	Q	G	K	I	V	L	E	D	G	T	L	H	V	T	E	G	S	G	R	Y	I	P	R	K	P	F	P	.	D	F
Template Known Secondary structure			S	T	T	S	B																T	T	T	S	S	S	S		S			T	T	T	T													T	T						T	T						T	T				B					S	S		.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.