Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 12 Aligned Residues 408 % Identity 12% Template c2ftwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydropyrimidine amidohydrolase; PDBTitle: crystal structure of dihydropyrimidinase from dictyostelium discoideum Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																																																									.	.	.	.
Query SS confidence																				.	.																																																									.	.	.	.
Query Sequence		N	A	L	Q	T	I	I	N	A	R	L	P	G	E	E	G	L	W	.	.	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	.	.	.	.
Query Conservation																				.	.																																																									.	.	.	.
Alig confidence																				.	.																			.																																						.	.	.	.
Template Conservation																																								.
Template Sequence		T	G	T	I	L	I	K	N	G	T	V	V	N	D	D	R	Y	F	K	S	D	V	L	V	E	N	G	I	I	K	E	I	S	K	N	I	E	P	.	K	E	G	I	K	V	V	D	A	T	D	K	L	L	L	P	G	G	I	D	T	H	T	H	F	Q	L	P	F	M	G	T	V	S	V	D	D	F	D	I	G
Template Known Secondary structure									S						S	S											T	T							S					.		S	S							T	T														T	T				T	T				S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		T	Q	A	A	V	A	G	G	T	T	F	I	I	D	F	V	I	P	T	R	G	Q	S	L	L	E	A	Y	D	Q	W	K	K	W	A	D	E	K	V	N	C	D	Y	S	L	H	V	A	I	T	W	W	S	E	Q	V	S	R	E	M	E	I	L	V	K	E	R	G	.	V	N	S	F	C	F	M	A	Y	K	N
Template Known Secondary structure								T	T												T	T																T	T		S	S										S																S		.			B			B	S	S		T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		S	F	M	V	T	D	Q	E	M	Y	H	I	F	K	R	C	K	E	L	G	A	I	A	Q	V	H	A	.	.	.	.	.	.	.	.	E	N	G	D	M	V	F	E	G	Q	K	K	M	L	E	M	G	I	T	G	P	E	G	H	E	L	S	R	P	E	A	L	E	A	E	A	T	N	R	A	I	V	I	A	D
Template Known Secondary structure		T	T	B																	T		B				B		.	.	.	.	.	.	.	.	S															T	T			S	T							S		T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																		.	.	.	.	.	.	.	300
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	I	T	R	V	K
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		S	V	C	T	P	V	Y	I	V	H	V	Q	.	.	.	.	.	.	S	I	G	A	A	D	V	I	C	K	H	R	K	E	G	V	R	V	Y	G	E	P	I	A	A	G	L	G	V	D	G	S	H	M	W	N	H	D	W	R	H	A	A	A	F	V	M	G	P	P	I	R	P	D	P	R	T	K	G	V	L	M
Template Known Secondary structure				T							S			.	.	.	.	.	.														T	T								B								G	G	G	G	G		S	S						T	T			S	S						T	T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320													.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																																															.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.																																															.	.
Query Sequence		E	M	L	E	S	G	I	N	V	C	F	G	H	D	D	V	F	D	P	W	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																																															.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template Conservation
Template Sequence		D	Y	L	A	R	G	D	L	D	C	V	G	T	D	N	C	T	F	C	A	D	Q	K	A	M	G	K	D	D	F	T	K	I	P	N	G	V	N	G	V	E	D	R	M	S	I	V	W	E	N	G	V	N	T	G	K	L	T	W	C	Q	F	V	R	A	T	S	S	E	R	A	R	I	F	N	I	Y	P	R	K
Template Known Secondary structure							T	S	S				B			B									G	G	G	T	T		G	G	G	S				B			T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	I	A	A	G	N	S	A	N	L	I	I	L	P	A	E	N	G	F	D	A	L	R	R	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	R	Y	S	V	R	G	G	K	V	I	A	S	T	Q	P	A	Q	T	T	V	Y	L	E	Q	P	E	A	I	D	Y	K	R
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	I	D	V	G	C	D	G	D	I	V	I	W	D	P	N	Q	S	K	T	I	S	K	D	T	H	H	H	A	V	D	F	N	I	F	E	G	I	K	V	T	G	I	A	V	T	T	I	V	A	G	N	I	V	W	S	D	N	K	L	S	C	V	K	G	S	G	R	F	V	P	R	P	P	F	G
Template Known Secondary structure		S			S	T	T	S	B																T	T	T				S	S	S			T	T	T	T													T	T						T	T						T	T				B					S	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.