Return to main results Retrieve Phyre Job Id

Job DescriptionP25524
Confidence100.00%DateThu Jan 5 11:41:56 GMT 2012
Rank5Aligned Residues375
% Identity18%Templatec2bb0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:imidazolonepropionase; PDBTitle: structure of imidazolonepropionase from bacillus subtilis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10. ........20. ........30.........40 .........50.........60....
Predicted Secondary structure 




.





................








.
















Query SS confidence 








.









. . . . . . . . . . . . . . . .


















.























Query Sequence  NNALQTIIN. ARLPGEEGLW. . . . . . . . . . . . . . . . QIHLQDGKISAIDAQSGVM. PITENSLDAEQGLVIPPFVEPHIH
Query Conservation       

 
.


       ................

 
 

 
  

      .     


  
  
 




 
 
Alig confidence 








.









................


















.























Template Conservation        
 
 
 


                

    
 
 

 
  

            


  
  
 




 
 
Template Sequence  KQIDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYEADEIIDCSGRLVTPGLVDPHTH
Template Known Secondary structure 





SS


GGGGT



TTTTTTTT

TT



B
Template Predicted Secondary structure 



















































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   65....70.........80.... .....90.........100.........110.........120.........130......
Predicted Secondary structure 













........




















Query SS confidence 



















. . . . . . . .



















































Query Sequence  LDTTQTAGQPNWNQSGTLFE. . . . . . . . GIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKA
Query Conservation                      ........                               
                    
Alig confidence 



















........



















































Template Conservation                                                             
                    
Template Sequence  LVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQ
Template Known Secondary structure 



S

GGGTT

TT
TS
TT

S

S
Template Predicted Secondary structure 












































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   137..140.........150.........160.........170.... .....180.........190.........200........
Predicted Secondary structure 














........












Query SS confidence 





































. . . . . . . .

































Query Sequence  MLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEAL. . . . . . . . RLGADVVGAIPHFEFTREYGVESLHKTFALAQKY
Query Conservation                                        ........                              
   
Alig confidence 





































........

































Template Conservation                                                                              
   
Template Sequence  LRVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFTETGVFTVSQSRRYLQKAAEA
Template Known Secondary structure  SSSSS

GGGTT
TTTT

SBB
TTSB
T
Template Predicted Secondary structure 
























Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   209210.........220.........230.........240.........250.........260.........270.........280........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  DRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFD
Query Conservation        
                               
                                         
Alig confidence 





















.........















.......























..
Template Conservation        
               .........                .......                        ..
Template Sequence  GFGLKIHADEIDPLGGAELAGK. . . . . . . . . LKAVSADHLVGTSDEG. . . . . . . IKKLAEAGTIAVLLPGTTFYLGKS. .
Template Known Secondary structure  T

SSS

S.........TT
S
TT

.......T

TT

..
Template Predicted Secondary structure 






.........





.......









..
Template SS confidence 















































































   243......250.........260.... .....270.........280 .........290.........300....
 
   289290.........300.........310.........320.........330.........340.........350.........360......
Predicted Secondary structure 

































..
Query SS confidence 













































































. .
Query Sequence  TYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQD. .
Query Conservation                   

    


                                  


   
 


  


  ..
Alig confidence  ......





























.......


































..
Template Conservation  ......       
   

 
  


          .......            


  


   
 


  


    
Template Sequence  . . . . . . TYARARAMIDEGVCVSLATDFNPGSSPTEN. . . . . . . IQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEA
Template Known Secondary structure  ......



TT




BBTTTB



.......S


TTTT
TTTS
Template Predicted Secondary structure  ......















.......









Template SS confidence 















































































   305....310.........320.........330.... .....340.........350.........360.........370.
 
   367..370.........380......... 390.........400........
Predicted Secondary structure 











..






Query SS confidence 






















. .


















Query Sequence  YGIAAGNSANLIILPAENGFDAL. . RRQVPVRYSVRGGKVIAST
Query Conservation 
 
  

 






 
      ..     
  
   
  
   
Alig confidence 






















..


















Template Conservation 
 
  
  




 
               
  
   
  
  
Template Sequence  GQLKAGRSADLVIWQAPNYMYIPYHYGVNHVHQVMKNGTIVVNR
Template Known Secondary structure  S

STTSB

SSSSTTS
SS

TT
Template Predicted Secondary structure 


















Template SS confidence 











































   372.......380.........390.........400.........410.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions