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Job DescriptionP25524
Confidence100.00%DateThu Jan 5 11:41:56 GMT 2012
Rank1Aligned Residues423
% Identity100%Templatec1r9yA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytosine deaminase; PDBTitle: bacterial cytosine deaminase d314a mutant.
Resolution1.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  ALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFE
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Template Sequence  ALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFE
Template Known Secondary structure 


B
TT

STTSS




TT
TT
S

TTTTT
TTSSS

SS

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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  GIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYP
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Template Conservation                                 
 
                                              
Template Sequence  GIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYP
Template Known Secondary structure  TTGGG

TT

STT
TTT

TT
SSSST
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  NGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVT
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Template Conservation                                   
      
                                       
Template Sequence  NGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVT
Template Known Secondary structure  TTT
S
GGGSSST


SS
TT

T
GGG
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  ASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLG
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Template Sequence  ASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDAVFDPWYPLG
Template Known Secondary structure 
GGGGGS
T

TTTT

SS






T



B
SSBTTB


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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  TANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKV
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Template Sequence  TANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKV
Template Known Secondary structure 
S
TT

SGGGGGGTTT
SS
SS
TTSB

SSSST


STT
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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   405....410.........420.......
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Query Sequence  IASTQPAQTTVYLEQPEAIDYKR
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Template Conservation 
                      
Template Sequence  IASTQPAQTTVYLEQPEAIDYKR
Template Known Secondary structure 




SSS
S

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   404.....410.........420......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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