Job Description P25524 Confidence 100.00% Date Thu Jan 5 11:41:56 GMT 2012 Rank 17 Aligned Residues 397 % Identity 17% Template c1gkpD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:hydantoinase; PDBTitle: d-hydantoinase (dihydropyrimidinase) from thermus sp. in2 space group c2221 Resolution 1.29 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.
Predicted Secondary structure																		.	.																																																								.	.	.	.
Query SS confidence																		.	.																																																								.	.	.	.
Query Sequence		L	Q	T	I	I	N	A	R	L	P	G	E	E	G	L	W	.	.	Q	I	H	L	Q	D	G	K	I	S	A	I	D	A	Q	S	G	V	M	P	I	T	E	N	S	L	D	A	E	Q	G	L	V	I	P	P	F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	.	.	.	.	N	Q	S
Query Conservation																		.	.																																																								.	.	.	.
Alig confidence																		.	.																			.																																					.	.	.	.
Template Conservation																																						.
Template Sequence		P	L	L	I	K	N	G	E	I	I	T	A	D	S	R	Y	K	A	D	I	Y	A	E	G	E	T	I	T	R	I	G	Q	N	L	E	A	.	P	P	G	T	E	V	I	D	A	T	G	K	Y	V	F	P	G	F	I	D	P	H	V	H	I	Y	L	P	F	M	A	T	F	A	K	D	T	H	E	T	G	S	K
Template Known Secondary structure													T	T										S	S	S	B						S	S				.		T	T							T	T	S													S	S				T	T				S
Template Predicted Secondary structure																																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M	L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G
Query Conservation
Alig confidence																																																																	.	.
Template Conservation																																																																	.	.
Template Sequence		A	A	L	M	G	G	T	T	T	Y	I	E	M	C	C	P	S	R	N	D	D	A	L	E	G	Y	Q	L	W	K	S	K	A	E	G	N	S	Y	C	D	Y	T	F	H	M	A	V	S	K	F	D	E	K	T	E	G	Q	L	R	E	I	V	A	.	.	D	G	I	S	S	F	I	F	L	S	Y	K	N	F	F
Template Known Secondary structure						T	T												T	T	S														T	T	T		S	S												S													.	.	T	T			B					S	S	T	T	T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		G	V	D	D	G	E	M	Y	Q	T	L	R	L	A	K	E	L	G	V	I	V	T	A	H	.	.	.	.	.	.	.	.	C	E	N	A	E	L	V	G	R	L	Q	Q	K	L	L	S	E	G	K	T	G	P	E	W	H	E	P	S	R	P	E	A	V	E	A	E	G	T	A	R	F	A	T	F	L	E	T	T
Template Known Secondary structure		B																	T		B					.	.	.	.	.	.	.	.		S															T	T			S	G	G	G	T	G	G	G	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y	P	K	R	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	R	V	K	E	M	L	E
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		G	A	T	G	Y	V	V	H	L	S	.	.	.	.	.	.	C	K	P	A	L	D	A	A	M	A	A	K	A	R	G	V	P	I	Y	I	E	S	V	I	P	H	F	L	L	D	K	T	Y	A	E	R	G	G	V	E	A	M	K	Y	I	M	S	P	P	L	R	D	K	R	N	Q	K	V	L	W	D	A	L	A
Template Known Secondary structure		T							S			.	.	.	.	.	.	S													T	T																G	G	G	G	G	S							T	T			S	S					T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.													.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		S	G	I	N	V	C	F	G	H	D	D	V	F	D	.	.	.	.	.	.	.	.	.	.	.	.	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q	D	.	.	Y	G	I	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Conservation
Template Sequence		Q	G	F	I	D	T	V	G	T	D	H	C	P	F	D	T	E	Q	K	L	L	G	K	E	A	F	T	A	I	P	N	G	I	P	A	I	E	D	R	V	N	L	L	Y	T	Y	G	V	S	R	G	R	L	D	I	H	R	F	V	D	A	A	S	T	K	A	A	K	L	F	G	L	F	P	R	K	G	T	I	A
Template Known Secondary structure		T	T	S	S							B									G	G	G	S	S		G	G	G	S				B			T	T	T									T	T	T	S	S	S											T							T	T		T	T	T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.																	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	N	S	A	N	L	I	I	L	P	A	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	A	L	R	R	Q	V	P	V	R	Y	S	V	R	G	G	K	V	I	A	S	T	Q	P	A	Q	T	T	V	Y	L	E	Q
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	S	D	A	D	L	V	V	Y	D	P	Q	Y	R	G	T	I	S	V	K	T	Q	H	V	N	N	D	Y	N	G	F	E	G	F	E	I	D	G	R	P	S	V	V	T	V	R	G	K	V	A	V	R	D	G	Q	F	V	G	E	K	G	W	G	K
Template Known Secondary structure		T	T	S	B								T	T							G	G	G			S	S	S	S			T	T	T	T				S									T	T						T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450