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Job DescriptionP0AEF0
Confidence97.50%DateThu Jan 5 11:23:10 GMT 2012
Rank183Aligned Residues140
% Identity14%Templatec4a4zA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.........100.........110.........120.........130.... .....140
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Query Sequence  IRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIIT. VADIMS
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Template Sequence  IPNPARSWPF. . . . ELDTFQKEAVYHL. . . . . . . . EQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSN
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   319320........ .330.........340. ........350.........360.........370.........380......
 
   141........150.. ....... 160.........170.........180.........190...
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Query Sequence  AMKDTFRNSGTS. . . . . . . . . . . . . . . . . . . EEQLLND. . . . . . . . LSNVDLLVIDEIGVQTESKYEKVIINQIVDRRSS
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Template Sequence  QKFRDFKETFVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHY. . VNDQDRGVVWEEVIIMLP
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   387..390.........400.........410.........420.........430.........440...... ...450.........460....
 
   194.....200.... .....210.....
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Query Sequence  SKRPTGMLTNS. . NMEEMTKLLGE
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Template Sequence  QHVKFILLSATVPNTYEFANWIGR
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   467..470.........480.........490
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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