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Job DescriptionP0AEF0
Confidence97.44%DateThu Jan 5 11:23:10 GMT 2012
Rank190Aligned Residues124
% Identity19%Templatec3lv8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.... .....140.........150...
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Query Sequence  NIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIIT. . . . . . . . . . . . . . . . . . . . . . . . VADIMSAMKDTFRNSGTSE
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Template Sequence  NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVE
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   154.....160......... 170.........180.
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Query Sequence  EQLLNDLSNVDLLVID. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EIGVQTESKYEK
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Template Sequence  NVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIDPKLGLERELDRIEKMDISFFE
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   182.......190.........200.........210.........220.
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Query Sequence  VIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRM
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Template Sequence  RARERYLELANSDDSVVMIDAAQSIEQVTADIRRALQDWL
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   167..170.........180.........190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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