Job Description P0AEF0 Confidence 98.36% Date Thu Jan 5 11:23:10 GMT 2012 Rank 78 Aligned Residues 133 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.							.	160	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.														.	.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.														.	.	.	.	.	.												.	.	.	.	.	.
Query Sequence		F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	C	N	E	L	L	L	R	G	K	S	V	L	I	I	T	.	.	.	.	.	.	.	V	A	D	I	M	S	A	M	K	D	T	F	R	.	.	.	.	.	.	N	S	G	T	S	E	E	Q	L	L	N	.	.	.	.	.	.	D	L	S	N
Query Conservation																																			.	.	.	.	.	.	.														.	.	.	.	.	.												.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.														.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G
Template Known Secondary structure								T	T	S	S															T	T										T	T															T	T							S	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	K	R	P	T	G	M	L	T	N	S	N	M	E	E	M	T	K	L	L	G	E	R	V	M	D	R	M	R	L	G	N	S	L	W	V	I	F	N	W	D	S	Y
Query Conservation
Alig confidence																																																			.	.
Template Conservation																																																			.	.
Template Sequence		I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	N	A	I	V	E	Q	.	.	A	R	Q	F	N	E	A	V	K	I	D	G	I	I	L	T	K	L	D	A	D	A	R
Template Known Secondary structure			S								S	S			S	S	S																S								T	T		T	T	T					.	.								S									S	G	G	G		S	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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