Job Description P0AEF0 Confidence 96.87% Date Thu Jan 5 11:23:10 GMT 2012 Rank 315 Aligned Residues 116 % Identity 14% Template c3d31B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																																											.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	L	L	L	R	G	K	S	V	L	I	I
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	S	G	E	Y	F	V	I	L	G	P	T	G	A	G	K	T	L	F	L	E	L	I	A	G	F	H	V	P	D	S	G	R	I	L	L	D	G	K	D	V	T	D	L	S	P	E	K	H	D	I	A	F	V	Y	Q	N	Y	S	L	F	P	H	M	N	V	K	K	N	L	E	F	G	M	R	M	K	K	I
Template Known Secondary structure				T	T										T												T	S	S			S							T	T				T	T	S						T						T	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.															.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	A	D	I	M	S	A	M	K	D	T	F	R	N	S	G	T	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	L	N	D	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	K	R	P	T	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																								.
Template Sequence		K	D	P	K	R	V	L	D	T	A	R	D	L	K	I	E	H	L	L	D	R	N	P	L	T	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	L	V	T	N	P	K	I	L	L	L	D	E	P	L	S	.	A	L	D	P	R	T	Q	E	N	A	R	E	M	L	S	V	L	H	K	K	N	K	L	T	V
Template Known Secondary structure														T	T		T	T	T	T	T	S		G	G	G	S														T	T	S			S						S	S	S	T	.	T	S																			T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	T	N	S	N	M	E	E	M	T	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	I	T	H	D	Q	T	E	A	R	I	M
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions